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The map label for this gene is 126454694

Identifier: 126454694

GI number: 126454694

Start: 1250688

End: 1251197

Strand: Reverse

Name: 126454694

Synonym: BURPS1106A_1276

Alternate gene names: NA

Gene position: 1251197-1250688 (Counterclockwise)

Preceding gene: 126451579

Following gene: 126455178

Centisome position: 31.37

GC content: 75.88

Gene sequence:

>510_bases
GTGATCGCGCCCGCGCTCCCGTCCGAGCCGCCGCCGCCGAGCGTGCGCCGCCGGCTCGCCGCGCTCGCGTACGAAAGCCT
GCTGCTGTTCGGCGTGGTGTTCTTCGCCGGCCTCATGTTCGGCGTGGCGCTGCAGCAGCGCAACGGCCTCGATCATCGCA
ACCTGCTCGCCGGCTGGATCGCGCTCGTCGTCGGCGCGTACTTCGTCTGGTTCTGGACGCACGGCGGCCAGACGCTGCCG
ATGAAGACCTGGCGGCTGCGCGTCGAGACCGCGCGCGGCGCGCCGCTGTCGGCCGGCCGCGCGCTCGCCCGCTACGCGCT
CGGCTGGCTGTGGTTCCTGCCGCCCCTCGCGCTGCACCCGCTCGCCGGCTTCCCGCTGCTCCGCACGCTCGCCGCGACGG
CCGTCTGGTTCGCGCTGTGGGCGCTCGCCGCGCGCCTGCATCCGAGCCGCCAGTTCCCGCACGACCGCCTCGCCGGCACC
CGCATCGTCGACGCGCCCCGCCGCGGCTGA

Upstream 100 bases:

>100_bases
GGCCTCGCCCGCGACGACGGGCGCCGTCACGCCGCCCACCGCGCCGACGCCCGTCTCGCCTTCCGAGGCGCCGTCGCTCT
TCAACGGTTCGTAAGCGCTC

Downstream 100 bases:

>100_bases
TTCCCCGTAATAAGAACGTCTCGTGACTGTCATGGCACAGTCACGCCCGCATGGCGCAATGCCGGTAACGTCAATCGGCG
CGAGTCATGCATGGGCAAAA

Product: RDD family protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Family Protein; Transmembrane Protein; RDD Family; RDD Family Membrane Protein; RDD Domain Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MIAPALPSEPPPPSVRRRLAALAYESLLLFGVVFFAGLMFGVALQQRNGLDHRNLLAGWIALVVGAYFVWFWTHGGQTLP
MKTWRLRVETARGAPLSAGRALARYALGWLWFLPPLALHPLAGFPLLRTLAATAVWFALWALAARLHPSRQFPHDRLAGT
RIVDAPRRG

Sequences:

>Translated_169_residues
MIAPALPSEPPPPSVRRRLAALAYESLLLFGVVFFAGLMFGVALQQRNGLDHRNLLAGWIALVVGAYFVWFWTHGGQTLP
MKTWRLRVETARGAPLSAGRALARYALGWLWFLPPLALHPLAGFPLLRTLAATAVWFALWALAARLHPSRQFPHDRLAGT
RIVDAPRRG
>Mature_169_residues
MIAPALPSEPPPPSVRRRLAALAYESLLLFGVVFFAGLMFGVALQQRNGLDHRNLLAGWIALVVGAYFVWFWTHGGQTLP
MKTWRLRVETARGAPLSAGRALARYALGWLWFLPPLALHPLAGFPLLRTLAATAVWFALWALAARLHPSRQFPHDRLAGT
RIVDAPRRG

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18735; Mature: 18735

Theoretical pI: Translated: 12.35; Mature: 12.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPALPSEPPPPSVRRRLAALAYESLLLFGVVFFAGLMFGVALQQRNGLDHRNLLAGWI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALVVGAYFVWFWTHGGQTLPMKTWRLRVETARGAPLSAGRALARYALGWLWFLPPLALHP
HHHHHHHHHHHHHCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
LAGFPLLRTLAATAVWFALWALAARLHPSRQFPHDRLAGTRIVDAPRRG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIAPALPSEPPPPSVRRRLAALAYESLLLFGVVFFAGLMFGVALQQRNGLDHRNLLAGWI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALVVGAYFVWFWTHGGQTLPMKTWRLRVETARGAPLSAGRALARYALGWLWFLPPLALHP
HHHHHHHHHHHHHCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
LAGFPLLRTLAATAVWFALWALAARLHPSRQFPHDRLAGTRIVDAPRRG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA