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The map label for this gene is mdcC [H]

Identifier: 126455140

GI number: 126455140

Start: 1439746

End: 1440063

Strand: Direct

Name: mdcC [H]

Synonym: BURPS1106A_1483

Alternate gene names: 126455140

Gene position: 1439746-1440063 (Clockwise)

Preceding gene: 126451719

Following gene: 126453963

Centisome position: 36.1

GC content: 71.7

Gene sequence:

>318_bases
ATGGAACAGTTGAACTATCGCCACACCGCGCGCGCGCGCGCGAAGGGCGACGCCGAGTGGGCGCTCGTCGGCGTCGTCGC
GTCGGGGAATCTCGAAGTGCTCGTCGAGCGCGTGCTGCCCGGCAACGAATGCGAGGTCGACATCCGCACGGCCGCCGTCG
GCTTCGGCGACGTGTGGCAGGCGGTGGTCGCCGATTTCGTCGAACGCCGCTCGCCGGGCGGGCTGCGGCTGTCGGTCAAC
GACGGCGGCGCGCGGCCCGACATGGTGTCGCTGCGGCTCGCGCAGGCGGTGCGTGCAATCGAGGCGAACGCGCGATGA

Upstream 100 bases:

>100_bases
CGGCTGCTCGCCGCGCGCTCGATCAAGGATCTCGTGCATTGGTCGGAGGGCCTCTACGCGCCGCCCGCCCGATTCCGCAA
TTGGTGAGGAGCGTTTCGCA

Downstream 100 bases:

>100_bases
ACGCGGCCGCCACGACGCTGCATCCGAAGCTCGCGCCGGCGGGCGCGAGCTGGTTCGAGGCGTCCGCGCGGCAGCGGCTC
GCGGGGCTCGTCGACGCCGG

Product: malonate decarboxylase subunit delta

Products: NA

Alternate protein names: Malonate decarboxylase subunit delta [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MEQLNYRHTARARAKGDAEWALVGVVASGNLEVLVERVLPGNECEVDIRTAAVGFGDVWQAVVADFVERRSPGGLRLSVN
DGGARPDMVSLRLAQAVRAIEANAR

Sequences:

>Translated_105_residues
MEQLNYRHTARARAKGDAEWALVGVVASGNLEVLVERVLPGNECEVDIRTAAVGFGDVWQAVVADFVERRSPGGLRLSVN
DGGARPDMVSLRLAQAVRAIEANAR
>Mature_105_residues
MEQLNYRHTARARAKGDAEWALVGVVASGNLEVLVERVLPGNECEVDIRTAAVGFGDVWQAVVADFVERRSPGGLRLSVN
DGGARPDMVSLRLAQAVRAIEANAR

Specific function: Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mdcC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009662
- ProDom:   PD015450 [H]

Pfam domain/function: PF06857 MdcD [H]

EC number: NA

Molecular weight: Translated: 11313; Mature: 11313

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLNYRHTARARAKGDAEWALVGVVASGNLEVLVERVLPGNECEVDIRTAAVGFGDVWQ
CCCCCCCHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHH
AVVADFVERRSPGGLRLSVNDGGARPDMVSLRLAQAVRAIEANAR
HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQLNYRHTARARAKGDAEWALVGVVASGNLEVLVERVLPGNECEVDIRTAAVGFGDVWQ
CCCCCCCHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHH
AVVADFVERRSPGGLRLSVNDGGARPDMVSLRLAQAVRAIEANAR
HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]