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The map label for this gene is accD [C]

Identifier: 126453963

GI number: 126453963

Start: 1440060

End: 1441007

Strand: Direct

Name: accD [C]

Synonym: BURPS1106A_1484

Alternate gene names: 126453963

Gene position: 1440060-1441007 (Clockwise)

Preceding gene: 126455140

Following gene: 126451859

Centisome position: 36.11

GC content: 75.42

Gene sequence:

>948_bases
ATGAACGCGGCCGCCACGACGCTGCATCCGAAGCTCGCGCCGGCGGGCGCGAGCTGGTTCGAGGCGTCCGCGCGGCAGCG
GCTCGCGGGGCTCGTCGACGCCGGTTCGCTCGACGAGTTCGCCGGCCCGCCCGCGCGGCTCGCGAGCCCGCATCTGCCGC
TGTTCGATTTGCCGCAGCAGTTCGACGACGGGATGATCGTCGGCCGCGCGACGCTCGCCGGCGAGCCCGTGTTCGTCGCC
GCGCAGGAAGGGCGCTTCATGGGCGGCGCGTTCGGCGAGGTGCACGGCGCGAAGCTCACGGGGCTGCTGCGCGCGGCGCG
CGAGCTGCGCGCGGCGCCCGTGCTGATCCTGTTCGATACGGGCGGCGTGCGGCTGCAGGAGGCGAACGCGGGCGAGATCG
CGGTGTCCGAGATCGTGCGCGCGGTGATCGATGCGCGCGCGGCGGGCGTGCCCGTCGTCGGGCTCGTCGGCGGGCGCGCG
GGCTGCTACGGCGGCGGCGGGATCATCGCCGCGTGCTGCTCGGCGCTCGCGGTGTCGGAGGCCGGGCGCATCGGCGTGTC
CGGGCCGGAAGTGATCGAGAGCCGGCGCGGCGTCGACGAATTCGATTCGCGCGACCGCGCGCTCGTCTGGCGCACCATGG
GCGGCAAGCATCGGCGGCTCGTCGGGGGCGCCGACGCCTTTGTCGACGATACGATCGACGCGTTTCGCCACGCCGCGATC
GCGCTTCTCGCGCGCGTGCGCGCGGGCGGGGCGTTCGGCACGGCGACGCTCGAAGCGGAGCACGCGCGCCTTGCCGCGCG
CATCGCGCGCTTTCGCGATTGCGACGACGCGCTCGACGTGTGGCGCGCGCTCGGCGCGCCCGACGCGGGCGCGATTCCCG
CGCTCGACGCCGCCGCGTTCGCGGCGCTCGCCGATCGGCTCACGGAGGTGTGCGATGACGCTCGATGA

Upstream 100 bases:

>100_bases
CGGGCGGGCTGCGGCTGTCGGTCAACGACGGCGGCGCGCGGCCCGACATGGTGTCGCTGCGGCTCGCGCAGGCGGTGCGT
GCAATCGAGGCGAACGCGCG

Downstream 100 bases:

>100_bases
CGTGCTGGCTTCACTGTTTCCGTCCGGGCACGACGTCGCGGCCGACGCCGCCGGCCTGCTTGCCGGGCACGGCATGCTCG
CGGGGCGCGCGCTCGACGTG

Product: malonate decarboxylase subunit beta

Products: NA

Alternate protein names: Transcarboxylase 12S subunit [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNAAATTLHPKLAPAGASWFEASARQRLAGLVDAGSLDEFAGPPARLASPHLPLFDLPQQFDDGMIVGRATLAGEPVFVA
AQEGRFMGGAFGEVHGAKLTGLLRAARELRAAPVLILFDTGGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRA
GCYGGGGIIAACCSALAVSEAGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGADAFVDDTIDAFRHAAI
ALLARVRAGGAFGTATLEAEHARLAARIARFRDCDDALDVWRALGAPDAGAIPALDAAAFAALADRLTEVCDDAR

Sequences:

>Translated_315_residues
MNAAATTLHPKLAPAGASWFEASARQRLAGLVDAGSLDEFAGPPARLASPHLPLFDLPQQFDDGMIVGRATLAGEPVFVA
AQEGRFMGGAFGEVHGAKLTGLLRAARELRAAPVLILFDTGGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRA
GCYGGGGIIAACCSALAVSEAGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGADAFVDDTIDAFRHAAI
ALLARVRAGGAFGTATLEAEHARLAARIARFRDCDDALDVWRALGAPDAGAIPALDAAAFAALADRLTEVCDDAR
>Mature_315_residues
MNAAATTLHPKLAPAGASWFEASARQRLAGLVDAGSLDEFAGPPARLASPHLPLFDLPQQFDDGMIVGRATLAGEPVFVA
AQEGRFMGGAFGEVHGAKLTGLLRAARELRAAPVLILFDTGGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRA
GCYGGGGIIAACCSALAVSEAGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGADAFVDDTIDAFRHAAI
ALLARVRAGGAFGTATLEAEHARLAARIARFRDCDDALDVWRALGAPDAGAIPALDAAAFAALADRLTEVCDDAR

Specific function: The 12S subunit specifically catalyzes the transfer of the carboxyl group of methylmalonyl CoA to the biotin of the 1.3S subunit forming propanoyl-CoA and carboxylated 1.3S-biotin [H]

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 carboxyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011763
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =2.1.3.1 [H]

Molecular weight: Translated: 32493; Mature: 32493

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAATTLHPKLAPAGASWFEASARQRLAGLVDAGSLDEFAGPPARLASPHLPLFDLPQQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCCCCHH
FDDGMIVGRATLAGEPVFVAAQEGRFMGGAFGEVHGAKLTGLLRAARELRAAPVLILFDT
CCCCEEEEEHEECCCCEEEEECCCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCEEEEECC
GGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRAGCYGGGGIIAACCSALAVSE
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC
AGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGADAFVDDTIDAFRHAAI
CCCCCCCCHHHHHHHCCCCHHCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHH
ALLARVRAGGAFGTATLEAEHARLAARIARFRDCDDALDVWRALGAPDAGAIPALDAAAF
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
AALADRLTEVCDDAR
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAAATTLHPKLAPAGASWFEASARQRLAGLVDAGSLDEFAGPPARLASPHLPLFDLPQQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCCCCHH
FDDGMIVGRATLAGEPVFVAAQEGRFMGGAFGEVHGAKLTGLLRAARELRAAPVLILFDT
CCCCEEEEEHEECCCCEEEEECCCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCEEEEECC
GGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRAGCYGGGGIIAACCSALAVSE
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC
AGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGADAFVDDTIDAFRHAAI
CCCCCCCCHHHHHHHCCCCHHCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHH
ALLARVRAGGAFGTATLEAEHARLAARIARFRDCDDALDVWRALGAPDAGAIPALDAAAF
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
AALADRLTEVCDDAR
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8366018 [H]