| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455122
Identifier: 126455122
GI number: 126455122
Start: 1484777
End: 1485850
Strand: Direct
Name: 126455122
Synonym: BURPS1106A_1526
Alternate gene names: NA
Gene position: 1484777-1485850 (Clockwise)
Preceding gene: 126452837
Following gene: 126451750
Centisome position: 37.23
GC content: 71.42
Gene sequence:
>1074_bases ATGCCGAATTGCGCCGACATTGCCGCCGCCGACCATGCCCGCCGCCGCGCGCTCGCGATGCGCCGCTATCGTGCCGGCGC GGCGTTGTGCGCGGCGGTGGCGCTCGTCGACGCCGTGTGGCTGCACGCGGGCGGCTATGCGTTGCAATGGTCCGGCGTGG CCGTGGCCGCGCGGGCGATCGCCGTCTGCGCGGCGTTCTCGCTCGTATTGCGCGGCGTCGCACGCGTGCCGCGCTACGCG AGCGTCGCGGCACGTTTTCGCTACGGTGAGGCCGCTCGCACGTTCGCATGGCTGGCGCTGCTGGCGGCGTTCGTCGCGGC GGCGGGCATCCTGTCCTACCTGTGCGTGACATTGAAGCCGCCGTTGATCGACGGTGCGCTGATTCGGCTCGACGCCCGCC TCGGCTTCGACTGGCCCGCCGTCTACGAGCGGATTCGCGCGCATCCGGCGCTGCAGCGCGCGCTCGCGTTCGCGTACGAC AGCGCGCAATGGCAGTTGATCGGGATACCGGTCTGGCTGGGCTTGACGAGGCGCGACGACGACCTGTCCGAGTTCATCGC GCTTTTCATGCTGACGAGCGTGATGGTGCTGCTGATTTCGACGCCGTTTCCGGCGGCGAGCGCGTTCCTGCATTTCCGGG TGGCCGATCCGATCGCGCTCGCCGGCGTGAGCGATTTCGTGCGATTGCGCGACGGGACGCTGCGCGTGATCGATCCGGCC GCGCTGCAAGGCATGGTATCGATGCCATCGTTCCATACGGTGCTTGGCGTGTTGTTCGCGTATGCGTTGCGGCGCGGGCG TGTCGTCGCGCCGCTCGCGCTGCTGTTCAACGGCTGGATGATCGCGTCGACGCCGACGCAGGGCGGTCATTACTTCGTCG ACGTGCTCGCCGGCCTGCTCGTTGCGTGTGCGGCGATCGCCGCGCTGCGCTACGCGGCCGATGCGCGCGCGGGAACCGGC GACACCGCGCGCTCCGGCCGGCCGCGGCCGTCGATGGCGGGGCCGGCGGCGGACGGCGAGGCGGCGCTTTCGGCGCGCGC CGCGCGCGCATCGCGGCCGAGCGGCGACGCGTGA
Upstream 100 bases:
>100_bases GGCCGCGTTTCGTCGGCTCCGGGCGCGCCGCGCACGGCGAACCGCCGAAACCATGCTGGAGACCGCCGGGCGCAACCGTC CGCCCGCCTCAGAGTGAATC
Downstream 100 bases:
>100_bases ACCGCCGACGGGCCTCGGGATTACATTGCGTTCGCCTGATTCGCTTGCTATCACAGATGACGACGGACGTTCGCATCCCG CGATATTCGCCCCGTCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPNCADIAAADHARRRALAMRRYRAGAALCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYA SVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALQRALAFAYD SAQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTG DTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA
Sequences:
>Translated_357_residues MPNCADIAAADHARRRALAMRRYRAGAALCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYA SVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALQRALAFAYD SAQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTG DTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA >Mature_356_residues PNCADIAAADHARRRALAMRRYRAGAALCAAVALVDAVWLHAGGYALQWSGVAVAARAIAVCAAFSLVLRGVARVPRYAS VAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKPPLIDGALIRLDARLGFDWPAVYERIRAHPALQRALAFAYDS AQWQLIGIPVWLGLTRRDDDLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPAA LQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLLVACAAIAALRYAADARAGTGD TARSGRPRPSMAGPAADGEAALSARAARASRPSGDA
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37814; Mature: 37683
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNCADIAAADHARRRALAMRRYRAGAALCAAVALVDAVWLHAGGYALQWSGVAVAARAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH AVCAAFSLVLRGVARVPRYASVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLIDGALIRLDARLGFDWPAVYERIRAHPALQRALAFAYDSAQWQLIGIPVWLGLTRRDD CCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC DLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEECHH ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLL HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH VACAAIAALRYAADARAGTGDTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PNCADIAAADHARRRALAMRRYRAGAALCAAVALVDAVWLHAGGYALQWSGVAVAARAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH AVCAAFSLVLRGVARVPRYASVAARFRYGEAARTFAWLALLAAFVAAAGILSYLCVTLKP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLIDGALIRLDARLGFDWPAVYERIRAHPALQRALAFAYDSAQWQLIGIPVWLGLTRRDD CCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC DLSEFIALFMLTSVMVLLISTPFPAASAFLHFRVADPIALAGVSDFVRLRDGTLRVIDPA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEECHH ALQGMVSMPSFHTVLGVLFAYALRRGRVVAPLALLFNGWMIASTPTQGGHYFVDVLAGLL HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH VACAAIAALRYAADARAGTGDTARSGRPRPSMAGPAADGEAALSARAARASRPSGDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA