| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451750
Identifier: 126451750
GI number: 126451750
Start: 1485972
End: 1486541
Strand: Direct
Name: 126451750
Synonym: BURPS1106A_1527
Alternate gene names: NA
Gene position: 1485972-1486541 (Clockwise)
Preceding gene: 126455122
Following gene: 126451943
Centisome position: 37.26
GC content: 65.61
Gene sequence:
>570_bases ATGGCCAGCCCGGTTGCCCACAAGATCATGATCGTGCGTCATGCGGAGAAACCGGCCGGTGACGGCGCGCCATACGGGGT GAACGCCAAGGGCGAGCAGGACGTGGAGGCGCTCACCGTGTTCGGCTGGCAACGCGCGGGCGCGCTCGCGGTGCTGTTTG CGCCGAGCCGGGGTCCGCTGCAGCACGCCGAGCTGGCGACGCCGGATTGGCTGTTCGCGGCGGCGGTCGCCAAGCATGCG AAGAGCGAGCGTCCGATCGACACGATCACGCCGCTCGCGCACAAACTGGGGCTCGCGATCGGCGACGCCTATACGAAAGG CCAGGAGAAGGATTTGGCCCAGGCAGCCGTCGCCAGCAAGGGATGCGTGCTGATCGCGTGGCAGCACGAAGACATTCCCG CCATCGCCGATGCGCTTCCGCTCGGCAAGCAGACGGTGCCGCAGAAATGGCCCGATGATCGCTTCGATATCGTCTGGGTG TTCGATCTCGACACCGGGAGCGGCACGTATCGGTTTAGCCAGGTGCCGCAGATGTTGTTGAAGGGCGATCGGAACAGCGT GATCGAGTGA
Upstream 100 bases:
>100_bases TACATTGCGTTCGCCTGATTCGCTTGCTATCACAGATGACGACGGACGTTCGCATCCCGCGATATTCGCCCCGTCTACGA ACAACGACAAGGAGGACGCC
Downstream 100 bases:
>100_bases GCGGCGAGGGCATTCGGCGCGGCGCGGATCGTTACACGGCCGTTCGACGGCGTTCGTCGATCGGGGGCGTGTTGCCGATG CCGGCGGGAATGGCGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPLQHAELATPDWLFAAAVAKHA KSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASKGCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWV FDLDTGSGTYRFSQVPQMLLKGDRNSVIE
Sequences:
>Translated_189_residues MASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPLQHAELATPDWLFAAAVAKHA KSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASKGCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWV FDLDTGSGTYRFSQVPQMLLKGDRNSVIE >Mature_188_residues ASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPLQHAELATPDWLFAAAVAKHAK SERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASKGCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWVF DLDTGSGTYRFSQVPQMLLKGDRNSVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20354; Mature: 20223
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPL CCCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEEECCCCCC QHAELATPDWLFAAAVAKHAKSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASK CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCC GCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWVFDLDTGSGTYRFSQVPQMLL CEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHHH KGDRNSVIE CCCCCCCCC >Mature Secondary Structure ASPVAHKIMIVRHAEKPAGDGAPYGVNAKGEQDVEALTVFGWQRAGALAVLFAPSRGPL CCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEEECCCCCC QHAELATPDWLFAAAVAKHAKSERPIDTITPLAHKLGLAIGDAYTKGQEKDLAQAAVASK CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCC GCVLIAWQHEDIPAIADALPLGKQTVPQKWPDDRFDIVWVFDLDTGSGTYRFSQVPQMLL CEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHHH KGDRNSVIE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA