| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455082
Identifier: 126455082
GI number: 126455082
Start: 3599423
End: 3600391
Strand: Direct
Name: 126455082
Synonym: BURPS1106A_3683
Alternate gene names: NA
Gene position: 3599423-3600391 (Clockwise)
Preceding gene: 126454682
Following gene: 126454464
Centisome position: 90.25
GC content: 61.82
Gene sequence:
>969_bases GTGCATCTCGTACAGACTATGGCGTTTGCCGGTGAGAAGCCCTGGCACGGCCTCGGCAACCACCTGCCCCCGAAGCAGTC GCTCGAAGTTTGGAAGCGCGCCGCAGGCATGGACTGGAGCATCGAAGAAGCTGAAGTTCGTTTCGTCGCAGCCGGCAGCA AGAGCCTTGGTTCGATCCACGCCTTTCCCGAGCAAAAGGTCTTGTATCGCTCGGACACCAAAGCTCCCCTGTCCGTCGTC TCATCGCGCTATGCCGTCGTACAGCCGTCCGAGATCCTAGAGTTTTATCGGGACCTGACCGAGCACTCGGGGTTCGAGCT TGAAAGTGCGGGCGTGCTAAAGCACGGCAAGAAACTCTGGGCGCTCGCGCGCACCGGGCAGTCCGTCGCGCTAAAAGGCA AGGATACGGTCAACGGCTATCTGCTGCTCGCGACGGCCTGCGACGGCACCCTCGCGACCACTGCACAGCACACGTCGATT CGCGTCGTGTGCAACAACACGCTGCAGGTTGCGCTGGGGAACTCGGCCGGCGCTGTGAAGGTTGGTCACCGCTCGCAGTT CGATGCGCAGGCCGTAAAGCGACAACTCGGAATCGCGACCTCCTCGTGGGATGCATTTGTAGCTCGAATGAAGGCACTAT CCGAGTACAAGCTGTCGGACTCTGCAGTCGAAGCCTTCCTTCGACGCGTACTTACCTATTCGGCTCCCGGCGCCGCCAAT CGCGAGGCACTGGCGGTCAATGAGCGGGCCATCAAAGCGATTGGACAGCTGTACTCGGGACGCGGAAAAGGCGCGGACCT TGCATCAGCTAGAGGCACGCTCTGGGGCGTTCTCAACGCCACCACGGAGTACGTCGACCACATCCGCCTCGCACGCAGCG ACGACAACCGACGCGACTCGGCCTGGTTCGGCTCGGGCGCCACCATCAAAGGCCGGGCGTGGGACGAAGCGCTCAAGCTT GTCGTGTAA
Upstream 100 bases:
>100_bases GCTGACTTGTCTCACCTACCGCCTTCTCAATTTTTCCATTTCGCTCTGCCCGGCGCTACATCGGGCTTTATGCCGTCAAC TATTCACAGGAGTTCAAAAA
Downstream 100 bases:
>100_bases CCCTTCGCCGCCCGTTTCCCCTCAACCTCGGCCCGGTCAGCTTCGCCTGCCGGGCCGCATTGTTTTGCGAGGCACTATGA CAGCAGTTCAATCTGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage/Plasmid-Related Protein Tigr; Phage/Plasmid-Like Protein; Phage/Plasmid-Like Protein TIGR; Phage/Plasmid-Related Protein
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MHLVQTMAFAGEKPWHGLGNHLPPKQSLEVWKRAAGMDWSIEEAEVRFVAAGSKSLGSIHAFPEQKVLYRSDTKAPLSVV SSRYAVVQPSEILEFYRDLTEHSGFELESAGVLKHGKKLWALARTGQSVALKGKDTVNGYLLLATACDGTLATTAQHTSI RVVCNNTLQVALGNSAGAVKVGHRSQFDAQAVKRQLGIATSSWDAFVARMKALSEYKLSDSAVEAFLRRVLTYSAPGAAN REALAVNERAIKAIGQLYSGRGKGADLASARGTLWGVLNATTEYVDHIRLARSDDNRRDSAWFGSGATIKGRAWDEALKL VV
Sequences:
>Translated_322_residues MHLVQTMAFAGEKPWHGLGNHLPPKQSLEVWKRAAGMDWSIEEAEVRFVAAGSKSLGSIHAFPEQKVLYRSDTKAPLSVV SSRYAVVQPSEILEFYRDLTEHSGFELESAGVLKHGKKLWALARTGQSVALKGKDTVNGYLLLATACDGTLATTAQHTSI RVVCNNTLQVALGNSAGAVKVGHRSQFDAQAVKRQLGIATSSWDAFVARMKALSEYKLSDSAVEAFLRRVLTYSAPGAAN REALAVNERAIKAIGQLYSGRGKGADLASARGTLWGVLNATTEYVDHIRLARSDDNRRDSAWFGSGATIKGRAWDEALKL VV >Mature_322_residues MHLVQTMAFAGEKPWHGLGNHLPPKQSLEVWKRAAGMDWSIEEAEVRFVAAGSKSLGSIHAFPEQKVLYRSDTKAPLSVV SSRYAVVQPSEILEFYRDLTEHSGFELESAGVLKHGKKLWALARTGQSVALKGKDTVNGYLLLATACDGTLATTAQHTSI RVVCNNTLQVALGNSAGAVKVGHRSQFDAQAVKRQLGIATSSWDAFVARMKALSEYKLSDSAVEAFLRRVLTYSAPGAAN REALAVNERAIKAIGQLYSGRGKGADLASARGTLWGVLNATTEYVDHIRLARSDDNRRDSAWFGSGATIKGRAWDEALKL VV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34880; Mature: 34880
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVQTMAFAGEKPWHGLGNHLPPKQSLEVWKRAAGMDWSIEEAEVRFVAAGSKSLGSIH CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEE AFPEQKVLYRSDTKAPLSVVSSRYAVVQPSEILEFYRDLTEHSGFELESAGVLKHGKKLW CCCCCCEEEECCCCCHHHHHHCCCEEECHHHHHHHHHHHHHCCCCEECCCCHHHHCHHHH ALARTGQSVALKGKDTVNGYLLLATACDGTLATTAQHTSIRVVCNNTLQVALGNSAGAVK HHHHCCCEEEECCCCCCCCEEEEEEECCCCEECCCCCCEEEEEECCEEEEEECCCCCEEE VGHRSQFDAQAVKRQLGIATSSWDAFVARMKALSEYKLSDSAVEAFLRRVLTYSAPGAAN ECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC REALAVNERAIKAIGQLYSGRGKGADLASARGTLWGVLNATTEYVDHIRLARSDDNRRDS CCEEEHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC AWFGSGATIKGRAWDEALKLVV CEECCCCEEECCCHHHHHHHCC >Mature Secondary Structure MHLVQTMAFAGEKPWHGLGNHLPPKQSLEVWKRAAGMDWSIEEAEVRFVAAGSKSLGSIH CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEE AFPEQKVLYRSDTKAPLSVVSSRYAVVQPSEILEFYRDLTEHSGFELESAGVLKHGKKLW CCCCCCEEEECCCCCHHHHHHCCCEEECHHHHHHHHHHHHHCCCCEECCCCHHHHCHHHH ALARTGQSVALKGKDTVNGYLLLATACDGTLATTAQHTSIRVVCNNTLQVALGNSAGAVK HHHHCCCEEEECCCCCCCCEEEEEEECCCCEECCCCCCEEEEEECCEEEEEECCCCCEEE VGHRSQFDAQAVKRQLGIATSSWDAFVARMKALSEYKLSDSAVEAFLRRVLTYSAPGAAN ECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC REALAVNERAIKAIGQLYSGRGKGADLASARGTLWGVLNATTEYVDHIRLARSDDNRRDS CCEEEHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCC AWFGSGATIKGRAWDEALKLVV CEECCCCEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA