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The map label for this gene is yqaJ [H]

Identifier: 126454464

GI number: 126454464

Start: 3600561

End: 3601463

Strand: Direct

Name: yqaJ [H]

Synonym: BURPS1106A_3684

Alternate gene names: 126454464

Gene position: 3600561-3601463 (Clockwise)

Preceding gene: 126455082

Following gene: 126451910

Centisome position: 90.27

GC content: 63.79

Gene sequence:

>903_bases
GTGCGCCGCACCGGAATCGGCGGTTCCGACGCAGCCGCGGCCGTCGGCCTGAGCCCATATGTGAGCCGCCTGGCGCTTTG
GATCGACAAGACCGGAAGGTCCGAAGGCATGCCGAGTCCGGCCCCGGACGATACTACCTCGCCCACCTATTGGGGGACCT
TGCTGGAACCGATTGTCGCTGCTGTCTACACGCGCGTCACCGGCAATCGCGTGCGTAAGATCAACGCGGTTCTGCGTCAT
CCGACGATCCCTTGGATGCTCGCCAACATCGACAGGGAAATCGTCGGGGCGAGCGATGTCCAGATCCTCGAGTGCAAGAC
CGCGGGAGAGCACGGCGCGCGACTGTGGCGCGACGGCGTCCCCGAGTACATCGAGTTGCAAGTACAGCATCAGTTGGCGG
TGACGGGTAAGGCAGCCGCCCATGTTGCCGTTCTGCTCTGCGGTCAAGCTCTCGAAGTATTCCGCGTCGAACGCGACGAC
GCCTTGATCGCCCGGCTCATCGAACTTGAGGAGCGCTTTTGGCGTTACGTCGAAACCGACACGCCGCCACCAGCGGACGG
CTCCGAGTCGGCAGACCGGGCCTTGCGGCATCTGTATCCCGGCAACGGCGGCACTGTGGACTTTACGGACGACCGACGCT
TGTCGTCCGTGTTTGCAGACCTCGTTGCGGTGCGGGCGGAGATCGAGGCGCGTCAGTCCATCGAGGCACAGCTCAAGCAG
ACGATCCAGCAGGCAATGGGCGAGGCCACGCACGCCGTGTTCGAGACAGGTTCGGTGTCGTTCAAACGCAGCCGCGATTC
GTCCAGCGTCGATCTGAAACGGCTGCTCGCCGATCACCCCGAGTTCGAGATGCAGTACGCAATCAGGAAGTCCGGGCCCC
GGCGCTTCCTGTTGTCCACCTGA

Upstream 100 bases:

>100_bases
AGGCACTATGACAGCAGTTCAATCTGAGAGGCCACGTACAGGCCGGCCGGCGCTCAAGCTCGTTAAGACGCGAGACCTGA
GCCGCGATGATTGGCTCTCT

Downstream 100 bases:

>100_bases
ACGCAGTCCGCTCGAGCACAGGCGAAAAACGAATCTCGACTGCCTGACCGCAATCATGACTTTCTCGCGGCACGGCGTGC
TCGCACAGGCGTTCGTAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRRTGIGGSDAAAAVGLSPYVSRLALWIDKTGRSEGMPSPAPDDTTSPTYWGTLLEPIVAAVYTRVTGNRVRKINAVLRH
PTIPWMLANIDREIVGASDVQILECKTAGEHGARLWRDGVPEYIELQVQHQLAVTGKAAAHVAVLLCGQALEVFRVERDD
ALIARLIELEERFWRYVETDTPPPADGSESADRALRHLYPGNGGTVDFTDDRRLSSVFADLVAVRAEIEARQSIEAQLKQ
TIQQAMGEATHAVFETGSVSFKRSRDSSSVDLKRLLADHPEFEMQYAIRKSGPRRFLLST

Sequences:

>Translated_300_residues
MRRTGIGGSDAAAAVGLSPYVSRLALWIDKTGRSEGMPSPAPDDTTSPTYWGTLLEPIVAAVYTRVTGNRVRKINAVLRH
PTIPWMLANIDREIVGASDVQILECKTAGEHGARLWRDGVPEYIELQVQHQLAVTGKAAAHVAVLLCGQALEVFRVERDD
ALIARLIELEERFWRYVETDTPPPADGSESADRALRHLYPGNGGTVDFTDDRRLSSVFADLVAVRAEIEARQSIEAQLKQ
TIQQAMGEATHAVFETGSVSFKRSRDSSSVDLKRLLADHPEFEMQYAIRKSGPRRFLLST
>Mature_300_residues
MRRTGIGGSDAAAAVGLSPYVSRLALWIDKTGRSEGMPSPAPDDTTSPTYWGTLLEPIVAAVYTRVTGNRVRKINAVLRH
PTIPWMLANIDREIVGASDVQILECKTAGEHGARLWRDGVPEYIELQVQHQLAVTGKAAAHVAVLLCGQALEVFRVERDD
ALIARLIELEERFWRYVETDTPPPADGSESADRALRHLYPGNGGTVDFTDDRRLSSVFADLVAVRAEIEARQSIEAQLKQ
TIQQAMGEATHAVFETGSVSFKRSRDSSSVDLKRLLADHPEFEMQYAIRKSGPRRFLLST

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 33120; Mature: 33120

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTGIGGSDAAAAVGLSPYVSRLALWIDKTGRSEGMPSPAPDDTTSPTYWGTLLEPIVA
CCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AVYTRVTGNRVRKINAVLRHPTIPWMLANIDREIVGASDVQILECKTAGEHGARLWRDGV
HHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCEEEEECCCCHHHHHHHHCCC
PEYIELQVQHQLAVTGKAAAHVAVLLCGQALEVFRVERDDALIARLIELEERFWRYVETD
CHHHEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
TPPPADGSESADRALRHLYPGNGGTVDFTDDRRLSSVFADLVAVRAEIEARQSIEAQLKQ
CCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIQQAMGEATHAVFETGSVSFKRSRDSSSVDLKRLLADHPEFEMQYAIRKSGPRRFLLST
HHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure
MRRTGIGGSDAAAAVGLSPYVSRLALWIDKTGRSEGMPSPAPDDTTSPTYWGTLLEPIVA
CCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AVYTRVTGNRVRKINAVLRHPTIPWMLANIDREIVGASDVQILECKTAGEHGARLWRDGV
HHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCEEEEECCCCHHHHHHHHCCC
PEYIELQVQHQLAVTGKAAAHVAVLLCGQALEVFRVERDDALIARLIELEERFWRYVETD
CHHHEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
TPPPADGSESADRALRHLYPGNGGTVDFTDDRRLSSVFADLVAVRAEIEARQSIEAQLKQ
CCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIQQAMGEATHAVFETGSVSFKRSRDSSSVDLKRLLADHPEFEMQYAIRKSGPRRFLLST
HHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]