Click here to switch to the map view.

The map label for this gene is 126455029

Identifier: 126455029

GI number: 126455029

Start: 1115629

End: 1115982

Strand: Reverse

Name: 126455029

Synonym: BURPS1106A_1134

Alternate gene names: NA

Gene position: 1115982-1115629 (Counterclockwise)

Preceding gene: 126452097

Following gene: 126455074

Centisome position: 27.98

GC content: 59.89

Gene sequence:

>354_bases
GTGAACATCGATCAGGACAGTCAGTTCACGGCGGGCGCGTTCACCGACGCCGTGCTGGGCCGACAGCTCCGGTTGTCGGT
GGGCGGCAACGGGGCTTGGCGCGACAACGTGTTCGTCGAGCGGACCTGGCGCAGCATCAAGTACGAAGAAGTCCATTTGA
AAGCGTACGAGTCGGTCTGCCACGCCCGGTGCTCCATCGCGAATACATCAATCTGTACAACCGGAAACGGCCCATTCGAG
CCTGGAGGACCAGACGCCGGACGAGGCATGCTTCGCGACGCTGCCTGCGATCAAATCGGCAGCATGATTGCGTCGGACGT
TCCACTTAAAAATCGCAGAAAACTGTCCGGATGA

Upstream 100 bases:

>100_bases
CGATTTTCGCCCACCGGCCTGCCACCGCATTGGAAGCCTCGCACGCTGTTGAGGCGCCGGAGGTGACGTTTCGTTTGCCC
GCTACGGGCGGCCAGGCGTC

Downstream 100 bases:

>100_bases
GCGAGGCCACCTCTGATCGACGATGCGACATCGCATGCCCCAGCCCGGCCGCGCCCTTTGCCCGGCATGTCTTTGATATA
CTCTTGCTCCCAAGTCGGCG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; Insertion Sequence; Integrase Core Domain Protein; Transposase-Related Protein

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNIDQDSQFTAGAFTDAVLGRQLRLSVGGNGAWRDNVFVERTWRSIKYEEVHLKAYESVCHARCSIANTSICTTGNGPFE
PGGPDAGRGMLRDAACDQIGSMIASDVPLKNRRKLSG

Sequences:

>Translated_117_residues
MNIDQDSQFTAGAFTDAVLGRQLRLSVGGNGAWRDNVFVERTWRSIKYEEVHLKAYESVCHARCSIANTSICTTGNGPFE
PGGPDAGRGMLRDAACDQIGSMIASDVPLKNRRKLSG
>Mature_117_residues
MNIDQDSQFTAGAFTDAVLGRQLRLSVGGNGAWRDNVFVERTWRSIKYEEVHLKAYESVCHARCSIANTSICTTGNGPFE
PGGPDAGRGMLRDAACDQIGSMIASDVPLKNRRKLSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12691; Mature: 12691

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDQDSQFTAGAFTDAVLGRQLRLSVGGNGAWRDNVFVERTWRSIKYEEVHLKAYESVC
CCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHH
HARCSIANTSICTTGNGPFEPGGPDAGRGMLRDAACDQIGSMIASDVPLKNRRKLSG
HHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNIDQDSQFTAGAFTDAVLGRQLRLSVGGNGAWRDNVFVERTWRSIKYEEVHLKAYESVC
CCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHH
HARCSIANTSICTTGNGPFEPGGPDAGRGMLRDAACDQIGSMIASDVPLKNRRKLSG
HHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA