| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455024
Identifier: 126455024
GI number: 126455024
Start: 2677754
End: 2678044
Strand: Reverse
Name: 126455024
Synonym: BURPS1106A_2708
Alternate gene names: NA
Gene position: 2678044-2677754 (Counterclockwise)
Preceding gene: 126452412
Following gene: 126454304
Centisome position: 67.14
GC content: 56.7
Gene sequence:
>291_bases ATGGCTTCCAACGGAGAAAAGGAAGTCATGAAGAAGAGCCGGTTTACCGAAGAACAGATGGTCACCATCCTGCGCGAGGC GGACAAGGCGCCGGTCGCGGAAGTTGCGAAGAAGCACGGGGTCAGCGAGCAAACCATTTACAACTGGCGACAACATTTCG GCGGGCTGGAGGCTGCCGACGTGAAGCGGCTCAAGCAGCTCGAGCAAGAGAATGCGCGGCTGAAGAAGATGCTGGCCGAG CGCGATCTCGAGCTGGACGTGATGAAAGAGATCAACGCAAAAAAGTGGTGA
Upstream 100 bases:
>100_bases TTTCCGTCTGCCTGTCATCTTGTGTGGTCGTCGGGATGTCGAGTTGCGACAGTGGCGGTGACCTGCCCTGGAATTTTCGG ACCAGTTGAAACTTGAGAGA
Downstream 100 bases:
>100_bases GCGCGCCCGCCCGACGCCAGCAGGTCACCTATGCGAAAGCACGGGGCCTGTCGGAGCGACGTGCGTGCGCGCTGATGTCG GTCGCCCGATCGGCGCTGCA
Product: transposase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MASNGEKEVMKKSRFTEEQMVTILREADKAPVAEVAKKHGVSEQTIYNWRQHFGGLEAADVKRLKQLEQENARLKKMLAE RDLELDVMKEINAKKW
Sequences:
>Translated_96_residues MASNGEKEVMKKSRFTEEQMVTILREADKAPVAEVAKKHGVSEQTIYNWRQHFGGLEAADVKRLKQLEQENARLKKMLAE RDLELDVMKEINAKKW >Mature_95_residues ASNGEKEVMKKSRFTEEQMVTILREADKAPVAEVAKKHGVSEQTIYNWRQHFGGLEAADVKRLKQLEQENARLKKMLAER DLELDVMKEINAKKW
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11157; Mature: 11026
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNGEKEVMKKSRFTEEQMVTILREADKAPVAEVAKKHGVSEQTIYNWRQHFGGLEAAD CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH VKRLKQLEQENARLKKMLAERDLELDVMKEINAKKW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC >Mature Secondary Structure ASNGEKEVMKKSRFTEEQMVTILREADKAPVAEVAKKHGVSEQTIYNWRQHFGGLEAAD CCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH VKRLKQLEQENARLKKMLAERDLELDVMKEINAKKW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2544911 [H]