| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454940
Identifier: 126454940
GI number: 126454940
Start: 3561757
End: 3563247
Strand: Reverse
Name: 126454940
Synonym: BURPS1106A_3659
Alternate gene names: NA
Gene position: 3563247-3561757 (Counterclockwise)
Preceding gene: 126455085
Following gene: 126451804
Centisome position: 89.34
GC content: 62.98
Gene sequence:
>1491_bases ATGAACCAGCAAACGGCTGCGGCCCAATCCACCGGCGTTCAAGCCGGCACGGAATCCTCGCTGCTCGACGAGATCGTCGA GAAGAGCAAGGTCGCGAAATCCGAATCCGAGCATGCGCGCGCGAAGGATCTGATCGGCGAGCTCGTCAGTCAGGTGCTTG ACGGCACGGTGGTGGTGTCGGACAACCTGTCGGCGACCATCGACGCGCGCGTCGCGGAGCTCGATCGCCTGATCTCGTCG CAGCTCTCGGCCGTGATGCACGCGGCGGAGTTCCAGCGTCTCGAGAGCACCTGGCGCGGGCTCGATTACCTGGTGAAGGA AAGCAACACCGGCTCGACGATCAAGATCAAGGCGCTGCACGCGCCGAAGCGCGATCTCGTGCGCGATTTCAAGAACGCGA CCGAGTTCGATCAGAGCGCGCTCTTCAAGAAGGTGTACGAAGAGGAATTCGGCACGTTCGGCGGCTCGCCGTTCGGCGTG CTGGTGGGCGACTACGAGATCTCGCGCCAGCCGGAAGACCAGTACTTCATCGAGCAGATGTCGCACGTCGCGGCCGCCGC GCACGCGCCGTTCATCGCGTCGGCGGCGCCCGAGCTGCTCGGGCTCGAATCGTTCGCGGATCTCGGCAAGCCGCGCGATC TCGGCAAGGTGTTCGATACCGTTGAATACGCGAAGTGGAAGTCGTTCCGCGATTCCGAGGATTCGCGCTACGTCGGCCTC ACGCTGCCGCGCTTTCTCGGCCGCCTGCCGTTCAATCCGAAGGACGGCGCGATCGCGGAGAGCTTCAACTTCGTCGAGGA CGTCGACGGCACCGATCACGACAAGTACCTGTGGTGCAACGCGTCGTGGGCGTTCGCCGCGCGCCTGACGGCGGCGTTCG ACGACTTCGGCTGGTGCGCGGCGATTCGCGGCGTCGAAGGCGGCGGCCTCGTCGAGGATCTGCCGACCCACACGTTCAAG ACCGACGACGGCGAAATCGCGCTCAAGTGCCCGACCGAGATCGCGATCACCGACCGCCGCGAGAAGGAACTGAGCGATCT CGGTTTCATCCCGCTCGTGCACTGCAAGAATTCCGATTACGCCGCGTTCTTTGCCGCGCAGTCGGTGCAGAAACCCAAGA AATACAGCACCGACAGCGCCAACGCGAACGCCGTCCTGTCCGCTCAGCTGCAGTACATCTTCTCGGTATCGCGCATCGCG CATTACCTGAAGGCGATGATGCGCGACAAGATCGGCAGCTTCGCGTCCGCGCAGAACGTCGAAACGTTCCTCAATCGCTG GATCTCGCAGTACGTGTTGCTCGACGACGACGCGACGCAGGAACAGAAGGCGCAGTTCCCGCTGCGCGAGGCCTCCGTAC AAGTGTCAGAGATTCCGGGCAAGCCGGGTGCGTATCGTTCGGTCGCGTTTTTGCGTCCGCACTTCCAGCTCGACGAGTTG TCGATTTCTCTGCGCCTTGTCGCTGATCTGCCCAAACCGGCAAATTCATAA
Upstream 100 bases:
>100_bases CTGCTGAGCGAAGTGCTGTCGAACACGCAGCAGCTCGAAGCGCTGAAGAAGAGCGCGGACGGCGGCGACAAGCAGGGCGA ATGAGTAACGGGGGGGTGAA
Downstream 100 bases:
>100_bases GCGAGCTGAGATCGCCCGGGCGGGCCGCCTGGGTAGGACGTTAAAACCACCTCTTTGGGGAGTCGAAAGACCATGTTACA CATGCATTTGAAGTTCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MNQQTAAAQSTGVQAGTESSLLDEIVEKSKVAKSESEHARAKDLIGELVSQVLDGTVVVSDNLSATIDARVAELDRLISS QLSAVMHAAEFQRLESTWRGLDYLVKESNTGSTIKIKALHAPKRDLVRDFKNATEFDQSALFKKVYEEEFGTFGGSPFGV LVGDYEISRQPEDQYFIEQMSHVAAAAHAPFIASAAPELLGLESFADLGKPRDLGKVFDTVEYAKWKSFRDSEDSRYVGL TLPRFLGRLPFNPKDGAIAESFNFVEDVDGTDHDKYLWCNASWAFAARLTAAFDDFGWCAAIRGVEGGGLVEDLPTHTFK TDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRIA HYLKAMMRDKIGSFASAQNVETFLNRWISQYVLLDDDATQEQKAQFPLREASVQVSEIPGKPGAYRSVAFLRPHFQLDEL SISLRLVADLPKPANS
Sequences:
>Translated_496_residues MNQQTAAAQSTGVQAGTESSLLDEIVEKSKVAKSESEHARAKDLIGELVSQVLDGTVVVSDNLSATIDARVAELDRLISS QLSAVMHAAEFQRLESTWRGLDYLVKESNTGSTIKIKALHAPKRDLVRDFKNATEFDQSALFKKVYEEEFGTFGGSPFGV LVGDYEISRQPEDQYFIEQMSHVAAAAHAPFIASAAPELLGLESFADLGKPRDLGKVFDTVEYAKWKSFRDSEDSRYVGL TLPRFLGRLPFNPKDGAIAESFNFVEDVDGTDHDKYLWCNASWAFAARLTAAFDDFGWCAAIRGVEGGGLVEDLPTHTFK TDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRIA HYLKAMMRDKIGSFASAQNVETFLNRWISQYVLLDDDATQEQKAQFPLREASVQVSEIPGKPGAYRSVAFLRPHFQLDEL SISLRLVADLPKPANS >Mature_496_residues MNQQTAAAQSTGVQAGTESSLLDEIVEKSKVAKSESEHARAKDLIGELVSQVLDGTVVVSDNLSATIDARVAELDRLISS QLSAVMHAAEFQRLESTWRGLDYLVKESNTGSTIKIKALHAPKRDLVRDFKNATEFDQSALFKKVYEEEFGTFGGSPFGV LVGDYEISRQPEDQYFIEQMSHVAAAAHAPFIASAAPELLGLESFADLGKPRDLGKVFDTVEYAKWKSFRDSEDSRYVGL TLPRFLGRLPFNPKDGAIAESFNFVEDVDGTDHDKYLWCNASWAFAARLTAAFDDFGWCAAIRGVEGGGLVEDLPTHTFK TDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRIA HYLKAMMRDKIGSFASAQNVETFLNRWISQYVLLDDDATQEQKAQFPLREASVQVSEIPGKPGAYRSVAFLRPHFQLDEL SISLRLVADLPKPANS
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54768; Mature: 54768
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQTAAAQSTGVQAGTESSLLDEIVEKSKVAKSESEHARAKDLIGELVSQVLDGTVVVS CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEE DNLSATIDARVAELDRLISSQLSAVMHAAEFQRLESTWRGLDYLVKESNTGSTIKIKALH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC APKRDLVRDFKNATEFDQSALFKKVYEEEFGTFGGSPFGVLVGDYEISRQPEDQYFIEQM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEECCCCCCHHHHHHHH SHVAAAAHAPFIASAAPELLGLESFADLGKPRDLGKVFDTVEYAKWKSFRDSEDSRYVGL HHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE TLPRFLGRLPFNPKDGAIAESFNFVEDVDGTDHDKYLWCNASWAFAARLTAAFDDFGWCA EHHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHH AIRGVEGGGLVEDLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDY HHCCCCCCCCHHHCCCCCEECCCCCEEEECCCEEEECCCHHHHHHHCCCEEEEEECCCCC AAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRIAHYLKAMMRDKIGSFASAQNV HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ETFLNRWISQYVLLDDDATQEQKAQFPLREASVQVSEIPGKPGAYRSVAFLRPHFQLDEL HHHHHHHHHHEEEECCCCCHHHHHCCCHHHHCEEHCCCCCCCCCCCEEHHHCCCCEEHHH SISLRLVADLPKPANS EEEEEEEECCCCCCCC >Mature Secondary Structure MNQQTAAAQSTGVQAGTESSLLDEIVEKSKVAKSESEHARAKDLIGELVSQVLDGTVVVS CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEE DNLSATIDARVAELDRLISSQLSAVMHAAEFQRLESTWRGLDYLVKESNTGSTIKIKALH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC APKRDLVRDFKNATEFDQSALFKKVYEEEFGTFGGSPFGVLVGDYEISRQPEDQYFIEQM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEECCCCCCHHHHHHHH SHVAAAAHAPFIASAAPELLGLESFADLGKPRDLGKVFDTVEYAKWKSFRDSEDSRYVGL HHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE TLPRFLGRLPFNPKDGAIAESFNFVEDVDGTDHDKYLWCNASWAFAARLTAAFDDFGWCA EHHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHH AIRGVEGGGLVEDLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDY HHCCCCCCCCHHHCCCCCEECCCCCEEEECCCEEEECCCHHHHHHHCCCEEEEEECCCCC AAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRIAHYLKAMMRDKIGSFASAQNV HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ETFLNRWISQYVLLDDDATQEQKAQFPLREASVQVSEIPGKPGAYRSVAFLRPHFQLDEL HHHHHHHHHHEEEECCCCCHHHHHCCCHHHHCEEHCCCCCCCCCCCEEHHHCCCCEEHHH SISLRLVADLPKPANS EEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA