| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451804
Identifier: 126451804
GI number: 126451804
Start: 3561181
End: 3561684
Strand: Reverse
Name: 126451804
Synonym: BURPS1106A_3658
Alternate gene names: NA
Gene position: 3561684-3561181 (Counterclockwise)
Preceding gene: 126454940
Following gene: 126452668
Centisome position: 89.3
GC content: 61.71
Gene sequence:
>504_bases ATGTTACACATGCATTTGAAGTTCGGTAGTCCCGCCATCAAGGGCGAGTCCGCTGACAAGGACCACGAAGGCTGGATCGA GCTGAAATCCTGGGATCACTCGATCGTTCAGCCGCGTTCGGCGACCGCGTCGACGGCGGGCGGCCACACGGCGACGCGTT GCGAGCACGGCGACATGGTGTTCACGAAGGAAATCGATTCGTCGAGCCCGCTGCTGTATCAGCACGCGTCGGGCGGCACC ACGTTCGACGAAGTGACGATCGATTTCCTGCGCGCGGACGGCGAAGGCCAGCGCGTGAAGTATCTCGAGATCAAGCTGAA GTACGTGATCATCTCGAGCATCGCGCCGAGCGTGCATACCGAAGGCCTGCCGGTCGAGACCTTCTCGCTGAAGTACGCCG CGGTCCAGTGGAAGCAGACGCAGCAGAAGATCGGCGGCAACCAGGGCGGCAACACGCAGGGCGCCTGGAGCCTCACGAAG AACGACAAGACCTACGCGGTCTAA
Upstream 100 bases:
>100_bases TGATCTGCCCAAACCGGCAAATTCATAAGCGAGCTGAGATCGCCCGGGCGGGCCGCCTGGGTAGGACGTTAAAACCACCT CTTTGGGGAGTCGAAAGACC
Downstream 100 bases:
>100_bases GTTCGACGCGGGAACGGGGCACGGTGCGTGCCCCGTTCCCGTTTTGCTTGCTGCCCGATGAAACGTTTCGAACCGAGCTT CCTCGACAAGCTGTTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMVFTKEIDSSSPLLYQHASGGT TFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHTEGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTK NDKTYAV
Sequences:
>Translated_167_residues MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMVFTKEIDSSSPLLYQHASGGT TFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHTEGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTK NDKTYAV >Mature_167_residues MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMVFTKEIDSSSPLLYQHASGGT TFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHTEGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTK NDKTYAV
Specific function: Unknown
COG id: COG3157
COG function: function code S; Hemolysin-coregulated protein (uncharacterized)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18335; Mature: 18335
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMV CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEE FTKEIDSSSPLLYQHASGGTTFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHT EEEECCCCCCEEEEECCCCCCHHHEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCC EGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTKNDKTYAV CCCCEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEECC >Mature Secondary Structure MLHMHLKFGSPAIKGESADKDHEGWIELKSWDHSIVQPRSATASTAGGHTATRCEHGDMV CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEE FTKEIDSSSPLLYQHASGGTTFDEVTIDFLRADGEGQRVKYLEIKLKYVIISSIAPSVHT EEEECCCCCCEEEEECCCCCCHHHEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCCC EGLPVETFSLKYAAVQWKQTQQKIGGNQGGNTQGAWSLTKNDKTYAV CCCCEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA