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The map label for this gene is yejB [H]

Identifier: 126454916

GI number: 126454916

Start: 2499806

End: 2500846

Strand: Reverse

Name: yejB [H]

Synonym: BURPS1106A_2546

Alternate gene names: 126454916

Gene position: 2500846-2499806 (Counterclockwise)

Preceding gene: 126453009

Following gene: 126455223

Centisome position: 62.7

GC content: 65.42

Gene sequence:

>1041_bases
ATGTGGAGCTACATCCTCAAACGTCTTCTGCTGATGATCCCGACGCTCGTCGGCGTCTTGACCATCACGTTCGCGGTGAT
CCAGTTCGTGCCGGGCGGCCCCGTCGAGCAGGCGGTGCAGGAGCTGCGCAAGGGCGCCGAGCGGGGCGGCGCGCCGTTCG
GGATGCGCTCGTACACGGGCGTCGACGCGCAGCAGCTCGCGCAACTGAAGGCGCTGTACGGCTTCGACAAGCCGCCCGTC
GAGCGCTACTGGCTGATGCTGGAGCGCTTCGCGCGCTTCGATCTCGGCGACAGCTACTTCCATCATCAGAGCGTGTGGTC
GCTTGTCGTGTCGAAGCTGCCGGTATCGATCAGCATCGGCGTGTGGACGTTCCTGCTCACTTACCTGATCTCGGTGCCGC
TCGGCATCGCGAAGGCGGTGAGCAACGGCTCGCCGTTCGATTTCGCGACGAGCCTCGTCGTGCTCGTCGGCTACGCGATC
CCGGGCTTCGTGCTCGGCGTGCTGCTGCTCGTGCTGTTCGGCGGCGGCTCGTTCTGGCAGATCTTCCCGCTGCACGGCCT
CACGTCGGACAACTTCGCGCAGCTCACGCTAGCCGGCAAGATCGCCGATTACCTGTGGCACATCGCGCTGCCCATCATCG
CCTCGGTCGTCGGCAGCTTCGCGGTGATCACGATGCTGACGAAGAACGCGTTCCTCGACGAGATCCGCAAGCAATACGTG
CTGACCGCGCGCGCGAAGGGGCTCGCCGAGCGCACCGTGCTGGGCAAGCACGTGTTCCGCAACGCGCTCCTGCCGCTCGT
CGTGGGCTTTCCGGCCGCGTTCATCGGCGCGTTCTTCACGGGCAGCCTGCTGATCGAGACGCTCTTCTCGCTCGACGGGC
TCGGGCTGCTGTCGTACGAATCGGTGATCCGGCGCGACTACCCGGTCGTGCTCGGCACGCTGTACATCTTCACGCTGATC
GGGCTCGCGACGAAGCTCGTGTCCGATCTCTGCTACGTGTGGGTCGACCCGCGCGTTCAATTCGAGCAACTGGAGCGCTG
A

Upstream 100 bases:

>100_bases
GCAGGCGCGGCGAAAGACGCGGCGCCAAGCGCGAGCCGGCGGGCGGCCGTTTTCCGCCGCGCCGATTGAAGAAACCGTAC
GAACACGCCCGAATGCGCCT

Downstream 100 bases:

>100_bases
TTTGAGCCGACTCGCCGTCTCTTCCCGGATCGACGCCGCGCGCGCGCGGGTATCGCCGTCGCCCGCGCGGCGCGTGTGGC
TGCGCTTCAAGGCGCAGCGC

Product: ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MWSYILKRLLLMIPTLVGVLTITFAVIQFVPGGPVEQAVQELRKGAERGGAPFGMRSYTGVDAQQLAQLKALYGFDKPPV
ERYWLMLERFARFDLGDSYFHHQSVWSLVVSKLPVSISIGVWTFLLTYLISVPLGIAKAVSNGSPFDFATSLVVLVGYAI
PGFVLGVLLLVLFGGGSFWQIFPLHGLTSDNFAQLTLAGKIADYLWHIALPIIASVVGSFAVITMLTKNAFLDEIRKQYV
LTARAKGLAERTVLGKHVFRNALLPLVVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVIRRDYPVVLGTLYIFTLI
GLATKLVSDLCYVWVDPRVQFEQLER

Sequences:

>Translated_346_residues
MWSYILKRLLLMIPTLVGVLTITFAVIQFVPGGPVEQAVQELRKGAERGGAPFGMRSYTGVDAQQLAQLKALYGFDKPPV
ERYWLMLERFARFDLGDSYFHHQSVWSLVVSKLPVSISIGVWTFLLTYLISVPLGIAKAVSNGSPFDFATSLVVLVGYAI
PGFVLGVLLLVLFGGGSFWQIFPLHGLTSDNFAQLTLAGKIADYLWHIALPIIASVVGSFAVITMLTKNAFLDEIRKQYV
LTARAKGLAERTVLGKHVFRNALLPLVVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVIRRDYPVVLGTLYIFTLI
GLATKLVSDLCYVWVDPRVQFEQLER
>Mature_346_residues
MWSYILKRLLLMIPTLVGVLTITFAVIQFVPGGPVEQAVQELRKGAERGGAPFGMRSYTGVDAQQLAQLKALYGFDKPPV
ERYWLMLERFARFDLGDSYFHHQSVWSLVVSKLPVSISIGVWTFLLTYLISVPLGIAKAVSNGSPFDFATSLVVLVGYAI
PGFVLGVLLLVLFGGGSFWQIFPLHGLTSDNFAQLTLAGKIADYLWHIALPIIASVVGSFAVITMLTKNAFLDEIRKQYV
LTARAKGLAERTVLGKHVFRNALLPLVVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVIRRDYPVVLGTLYIFTLI
GLATKLVSDLCYVWVDPRVQFEQLER

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=53.0386740331492, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1789965, Length=359, Percent_Identity=32.033426183844, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1787497, Length=342, Percent_Identity=28.0701754385965, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1787053, Length=342, Percent_Identity=28.0701754385965, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789888, Length=344, Percent_Identity=26.453488372093, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787761, Length=351, Percent_Identity=25.6410256410256, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787550, Length=261, Percent_Identity=21.8390804597701, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38190; Mature: 38190

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSYILKRLLLMIPTLVGVLTITFAVIQFVPGGPVEQAVQELRKGAERGGAPFGMRSYTG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VDAQQLAQLKALYGFDKPPVERYWLMLERFARFDLGDSYFHHQSVWSLVVSKLPVSISIG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEHH
VWTFLLTYLISVPLGIAKAVSNGSPFDFATSLVVLVGYAIPGFVLGVLLLVLFGGGSFWQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IFPLHGLTSDNFAQLTLAGKIADYLWHIALPIIASVVGSFAVITMLTKNAFLDEIRKQYV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTARAKGLAERTVLGKHVFRNALLPLVVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SVIRRDYPVVLGTLYIFTLIGLATKLVSDLCYVWVDPRVQFEQLER
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MWSYILKRLLLMIPTLVGVLTITFAVIQFVPGGPVEQAVQELRKGAERGGAPFGMRSYTG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VDAQQLAQLKALYGFDKPPVERYWLMLERFARFDLGDSYFHHQSVWSLVVSKLPVSISIG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEHH
VWTFLLTYLISVPLGIAKAVSNGSPFDFATSLVVLVGYAIPGFVLGVLLLVLFGGGSFWQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IFPLHGLTSDNFAQLTLAGKIADYLWHIALPIIASVVGSFAVITMLTKNAFLDEIRKQYV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTARAKGLAERTVLGKHVFRNALLPLVVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SVIRRDYPVVLGTLYIFTLIGLATKLVSDLCYVWVDPRVQFEQLER
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]