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The map label for this gene is yejE [H]

Identifier: 126455223

GI number: 126455223

Start: 2498707

End: 2499804

Strand: Reverse

Name: yejE [H]

Synonym: BURPS1106A_2545

Alternate gene names: 126455223

Gene position: 2499804-2498707 (Counterclockwise)

Preceding gene: 126454916

Following gene: 126452152

Centisome position: 62.68

GC content: 67.76

Gene sequence:

>1098_bases
TTGAGCCGACTCGCCGTCTCTTCCCGGATCGACGCCGCGCGCGCGCGGGTATCGCCGTCGCCCGCGCGGCGCGTGTGGCT
GCGCTTCAAGGCGCAGCGCCTCGGCTACTGGAGCCTCGTGATCTTCGCGATCGCGTTCGCCGCGAGCCTGGCCGCGCCGC
TGTGGTCGAACGACAAGCCGCTCGTCGTGCGCTACGACGGCCAGTTCTATTTCCCGCTCTTCAAGAGCTACCCGGAAACG
ACCTTCGGCGGCGATTTTCCGACGCCCGCCGACTATCTCGATCCGTACGTGCGCGGCAAGCTCGACGCGCCGGGCAACTT
CGTGCTGTATCCGCCGAACCGCTATTACTACGACACGCTCAACTACTTCTCGAAGCGCCCGAACCCGGCGCCGCCGTCGC
GCGAGAACTGGCTCGGCACCGACGCGCAAGGGCGCGACCTGCTCGCGCGGCTCGTCTACGGCTTTCGCGTGTCGGTCGAG
TTCGCGCTGATCCTGACGTTCATCGGCACGCTGCTCGGCATCGCGGCGGGCGCGGTGCAGGGGTTCTTCGGCGGGCGCAT
CGACATCGTCGGCCAGCGGCTCATCGAAATCTGGAGCTCGATGCCCGAGCTGTATCTGCTGATCATCTTCGCGTCCGTGT
TCGAGCCGAGCTTCGTGCTGCTGATCGTGCTGTTGTCGCTGTTCGGCTGGATCGGCCTGTCCGATTACGTGCGCGCCGAG
TTCCTGCGCAACCGCACGCAGGACTACGTGCGCGCCGCGCGCGCGATGGGCCTCACGAACTGGCAGATCATCTGGCGCCA
CGTGCTGCCCAACAGCCTCACGCCCGTCATCACGTTCCTGCCGTTCAGGATGAGCGGCGCGATTCTCGCGCTCACGAGCC
TCGACTTCCTCGGGCTCGGCGTGCCGCCGCCGACGCCGAGCCTCGGCGAGCTGCTCGCGCAGGGCAAGGCGAATCTCGAC
GCGTGGTGGATCTCGCTCGCGACGTTCTGCGTGCTCGTCGCGACGCTGTTGCTGCTCACGTTCATGGGCGACGCGCTGCG
CAACGCGCTCGACACGCGGATCGCGGATACCGCGCGCGCCGCGGGGCGTCTGCAATGA

Upstream 100 bases:

>100_bases
TACATCTTCACGCTGATCGGGCTCGCGACGAAGCTCGTGTCCGATCTCTGCTACGTGTGGGTCGACCCGCGCGTTCAATT
CGAGCAACTGGAGCGCTGAT

Downstream 100 bases:

>100_bases
GCGCCGCGCAGATCGCGCGCGGCGCCGGCGCGCCGCCGTCGCCGTCGACGCCGCCGCATGAGCCGTTGCTGTCGATCGAG
CGGCTGCGCGTGCGCTTCGG

Product: ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSRLAVSSRIDAARARVSPSPARRVWLRFKAQRLGYWSLVIFAIAFAASLAAPLWSNDKPLVVRYDGQFYFPLFKSYPET
TFGGDFPTPADYLDPYVRGKLDAPGNFVLYPPNRYYYDTLNYFSKRPNPAPPSRENWLGTDAQGRDLLARLVYGFRVSVE
FALILTFIGTLLGIAAGAVQGFFGGRIDIVGQRLIEIWSSMPELYLLIIFASVFEPSFVLLIVLLSLFGWIGLSDYVRAE
FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLGVPPPTPSLGELLAQGKANLD
AWWISLATFCVLVATLLLLTFMGDALRNALDTRIADTARAAGRLQ

Sequences:

>Translated_365_residues
MSRLAVSSRIDAARARVSPSPARRVWLRFKAQRLGYWSLVIFAIAFAASLAAPLWSNDKPLVVRYDGQFYFPLFKSYPET
TFGGDFPTPADYLDPYVRGKLDAPGNFVLYPPNRYYYDTLNYFSKRPNPAPPSRENWLGTDAQGRDLLARLVYGFRVSVE
FALILTFIGTLLGIAAGAVQGFFGGRIDIVGQRLIEIWSSMPELYLLIIFASVFEPSFVLLIVLLSLFGWIGLSDYVRAE
FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLGVPPPTPSLGELLAQGKANLD
AWWISLATFCVLVATLLLLTFMGDALRNALDTRIADTARAAGRLQ
>Mature_364_residues
SRLAVSSRIDAARARVSPSPARRVWLRFKAQRLGYWSLVIFAIAFAASLAAPLWSNDKPLVVRYDGQFYFPLFKSYPETT
FGGDFPTPADYLDPYVRGKLDAPGNFVLYPPNRYYYDTLNYFSKRPNPAPPSRENWLGTDAQGRDLLARLVYGFRVSVEF
ALILTFIGTLLGIAAGAVQGFFGGRIDIVGQRLIEIWSSMPELYLLIIFASVFEPSFVLLIVLLSLFGWIGLSDYVRAEF
LRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLGVPPPTPSLGELLAQGKANLDA
WWISLATFCVLVATLLLLTFMGDALRNALDTRIADTARAAGRLQ

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=341, Percent_Identity=50.4398826979472, Blast_Score=351, Evalue=4e-98,
Organism=Escherichia coli, GI1787054, Length=243, Percent_Identity=30.0411522633745, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1787760, Length=232, Percent_Identity=33.1896551724138, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI1787498, Length=250, Percent_Identity=31.2, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1789964, Length=235, Percent_Identity=33.6170212765957, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1789889, Length=225, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1787549, Length=248, Percent_Identity=28.2258064516129, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40762; Mature: 40631

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLAVSSRIDAARARVSPSPARRVWLRFKAQRLGYWSLVIFAIAFAASLAAPLWSNDKP
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
LVVRYDGQFYFPLFKSYPETTFGGDFPTPADYLDPYVRGKLDAPGNFVLYPPNRYYYDTL
EEEEECCEEEEHHHHCCCCCCCCCCCCCCHHHHCHHHCCCCCCCCCEEEECCCCEEHHHH
NYFSKRPNPAPPSRENWLGTDAQGRDLLARLVYGFRVSVEFALILTFIGTLLGIAAGAVQ
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFFGGRIDIVGQRLIEIWSSMPELYLLIIFASVFEPSFVLLIVLLSLFGWIGLSDYVRAE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHH
FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC
VPPPTPSLGELLAQGKANLDAWWISLATFCVLVATLLLLTFMGDALRNALDTRIADTARA
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRLQ
HCCCC
>Mature Secondary Structure 
SRLAVSSRIDAARARVSPSPARRVWLRFKAQRLGYWSLVIFAIAFAASLAAPLWSNDKP
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
LVVRYDGQFYFPLFKSYPETTFGGDFPTPADYLDPYVRGKLDAPGNFVLYPPNRYYYDTL
EEEEECCEEEEHHHHCCCCCCCCCCCCCCHHHHCHHHCCCCCCCCCEEEECCCCEEHHHH
NYFSKRPNPAPPSRENWLGTDAQGRDLLARLVYGFRVSVEFALILTFIGTLLGIAAGAVQ
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFFGGRIDIVGQRLIEIWSSMPELYLLIIFASVFEPSFVLLIVLLSLFGWIGLSDYVRAE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHH
FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC
VPPPTPSLGELLAQGKANLDAWWISLATFCVLVATLLLLTFMGDALRNALDTRIADTARA
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRLQ
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]