| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is mtnN [H]
Identifier: 126454861
GI number: 126454861
Start: 1652639
End: 1653427
Strand: Direct
Name: mtnN [H]
Synonym: BURPS1106A_1693
Alternate gene names: 126454861
Gene position: 1652639-1653427 (Clockwise)
Preceding gene: 126453724
Following gene: 126453706
Centisome position: 41.44
GC content: 71.74
Gene sequence:
>789_bases ATGAATCAGCAGACGTTTTTCGATCGGCCGCTCGGCATTCTCGCCGCGCTGCCGGAGGAGCTGGGCGACCTCGTCGCGGC GATGCGCGACGACGGGCCCGTCGACACGGTCACGCTCGGCCGGCGCGATTACCACGTGGGCGTCGCGCACGGCGTGCGCT GCGTCGTCACGCTCGCGCGGGTCGGCAAGGTCGCGGCGGCCGCGACGGCGAGCGCGCTCATCCATCGCTTCGACGTGCGC GCGATCGTGTTCACGGGCGTCGCGGGCGGCGTCGCGAGCGACGTGAGCGTCGGCGACGTCGTCGTCGCCGATGCGCTGCT GCAGCACGATCTCGACGCGTCGCCGCTCTTTCCGCGCTTCGAGGTGCCGCTGCTCGGGCTCACGCGCTTCGCCGCCGACG CGGCGCTCGCCGCGCAGCTGAAGGCGGCCTGCGCGCGCTTCGTCGACGACGAGGGCGAGACGCTGAACGCGCGTTTCCGG CTGCACGGCGCACGCGTGCACGCAGGGCTCATCGTCAGCGGCGACCGCTTCGTGTCGAGCGAGCGCGAGGTGAGCGCGCT GCGCGACGCGCTGCCGGACGCGCTCGCGGTGGAGATGGAAGGCGCGGCGCTCGCGCAGGTGTGCCATGAGTACGGCGTGC CGTGCGCGATCGTTCGCACGATCTCGGATACCGCCGACGATCACGCGAGCACGTCGTTCACGACATTTCTCACCGACATC GCGGGCGCCTATTCGTCGGGCATCCTGAAGCGGTTTCTGGCCGCGCACGCGCGGGCGAACGCGGCTTGA
Upstream 100 bases:
>100_bases CGCTCGAAGGCAGCGGCACCGACGCGAAGGCGCAAGTCAAATTCAAGCGGCACGGCGAGAAGTGGCTCGCGCTCGCGGTC GCGAAACTGCAGGCGGTCGA
Downstream 100 bases:
>100_bases GCCGAAAGGGCGAATCCGGGGCGGGCGGCGCGTGCCGGCGATCGCCCGCCGGACGTTTCGGTCGCTCGGGGCCTTCGGGT TTCCGAGGCGCGCCAAGCGC
Product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Products: NA
Alternate protein names: 5'-methylthioadenosine nucleosidase; S-adenosylhomocysteine nucleosidase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNQQTFFDRPLGILAALPEELGDLVAAMRDDGPVDTVTLGRRDYHVGVAHGVRCVVTLARVGKVAAAATASALIHRFDVR AIVFTGVAGGVASDVSVGDVVVADALLQHDLDASPLFPRFEVPLLGLTRFAADAALAAQLKAACARFVDDEGETLNARFR LHGARVHAGLIVSGDRFVSSEREVSALRDALPDALAVEMEGAALAQVCHEYGVPCAIVRTISDTADDHASTSFTTFLTDI AGAYSSGILKRFLAAHARANAA
Sequences:
>Translated_262_residues MNQQTFFDRPLGILAALPEELGDLVAAMRDDGPVDTVTLGRRDYHVGVAHGVRCVVTLARVGKVAAAATASALIHRFDVR AIVFTGVAGGVASDVSVGDVVVADALLQHDLDASPLFPRFEVPLLGLTRFAADAALAAQLKAACARFVDDEGETLNARFR LHGARVHAGLIVSGDRFVSSEREVSALRDALPDALAVEMEGAALAQVCHEYGVPCAIVRTISDTADDHASTSFTTFLTDI AGAYSSGILKRFLAAHARANAA >Mature_262_residues MNQQTFFDRPLGILAALPEELGDLVAAMRDDGPVDTVTLGRRDYHVGVAHGVRCVVTLARVGKVAAAATASALIHRFDVR AIVFTGVAGGVASDVSVGDVVVADALLQHDLDASPLFPRFEVPLLGLTRFAADAALAAQLKAACARFVDDEGETLNARFR LHGARVHAGLIVSGDRFVSSEREVSALRDALPDALAVEMEGAALAQVCHEYGVPCAIVRTISDTADDHASTSFTTFLTDI AGAYSSGILKRFLAAHARANAA
Specific function: Responsible for cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH) [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786354, Length=230, Percent_Identity=33.9130434782609, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 27488; Mature: 27488
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQTFFDRPLGILAALPEELGDLVAAMRDDGPVDTVTLGRRDYHVGVAHGVRCVVTLAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHH VGKVAAAATASALIHRFDVRAIVFTGVAGGVASDVSVGDVVVADALLQHDLDASPLFPRF HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC EVPLLGLTRFAADAALAAQLKAACARFVDDEGETLNARFRLHGARVHAGLIVSGDRFVSS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEEEEECCHHHCC EREVSALRDALPDALAVEMEGAALAQVCHEYGVPCAIVRTISDTADDHASTSFTTFLTDI HHHHHHHHHHCCCHHEEEECCHHHHHHHHHHCCCEEEHHHHHHCCCHHCCHHHHHHHHHH AGAYSSGILKRFLAAHARANAA HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNQQTFFDRPLGILAALPEELGDLVAAMRDDGPVDTVTLGRRDYHVGVAHGVRCVVTLAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHH VGKVAAAATASALIHRFDVRAIVFTGVAGGVASDVSVGDVVVADALLQHDLDASPLFPRF HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC EVPLLGLTRFAADAALAAQLKAACARFVDDEGETLNARFRLHGARVHAGLIVSGDRFVSS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEEEEECCHHHCC EREVSALRDALPDALAVEMEGAALAQVCHEYGVPCAIVRTISDTADDHASTSFTTFLTDI HHHHHHHHHHCCCHHEEEECCHHHHHHHHHHCCCEEEHHHHHHCCCHHCCHHHHHHHHHH AGAYSSGILKRFLAAHARANAA HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]