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The map label for this gene is glgB

Identifier: 126454792

GI number: 126454792

Start: 1518312

End: 1520528

Strand: Reverse

Name: glgB

Synonym: BURPS1106A_1566

Alternate gene names: 126454792

Gene position: 1520528-1518312 (Counterclockwise)

Preceding gene: 126451623

Following gene: 126454362

Centisome position: 38.12

GC content: 73.21

Gene sequence:

>2217_bases
ATGACGGATGCGCCCTTCGATCGCGCCGACATCGACGCGCTCCTCGACGCGCGCCATCCGGACCCGTTCGCGTGCCTCGG
CCCGCACCGCGTCGGCGACGCGACGGTCGTGCGCACGCTGCTGCCCGGCGCGCTGCGGGTTCGCGCGATCGCGGCGGGCG
GCGGCGTGCTCGGCGAGCTGCGGCAGGTCGATCCGGCCGGCTGCTTCGCCGGCGCGCTGCCCGATGGGCGGGAACGCGGC
GAGCGGCCGCGCTATCGGCTGTCGATCGACTGGCCCGACGCGCGACAGGACGTGGAGGACGCGTATGCGTTCGGCACGCT
GCTCGACGAGGATGCGCTCGCGCGCTTCGCGGCGGGCGATCCGCGCGCGGCGCTCGCGTGCCTCGGCGCGCGCGCGCTCG
ACATGGATGGCGTGCCCGGCGTGCGGTTCGCCGTCTGGGCGCCGGGCGCGTCGCGCGTGTCGGTGGTCGGCGATTTCAAC
GGCTGGGATGCGCGCCGCCACCCGATGCGGCTGCGCCGCCCGTGGGGCGTGTGGGAGCTGTTCGTGCCGCGCATCGGCGC
GGGCGAGCGCTACAAGTTCGCGCTGCGCGCGCGCGACGGCGCCGCGCTGCCGCTGAAGGCCGACCCGTGCGCGTGCCGCA
CCGAGGCGCCGCCGCGCACCGCGTCGATCGTCGCCGATCTCGACGCGCTCGAGCGCTTCGGCTGGCACGACGACGCGTGG
CTGCGCGCGCGCGCGTCGCTCGATCTCGCGCACGCGCCGGTGTCGATCTACGAAGTCCATCCGGAATCGTGGCTGCGCGT
CGCGGCCGAGGGCAATCGCAGCGCGACGTGGGACGAGCTCGCGCAGCGGCTGATTCCGTATGCGGCCGGCATGGGCTTCT
CGCACGTCGAGCTCACGCCGATCGCCGAGTATCCGTTCGGCGGCTCGTGGGGCTACCAGTCGCTATCGCCGTTCGCGCCG
TCCGCGCGGTTCGGGCCGCCGGAAGGCTTCGCGCGCTTCGTCGAGCACGCGCACGCGGCCGGCCTCGGCGTGATCGTCGA
CTGGGTGCCCGCGCACTTTCCCGACGATCCGCACGGGCTCGGCAAATTCGACGGCACCGCGCTGTTCGAGCATGCGGACC
CGCGCGAGGGATGGCATCCGGACTGGCACACGCACGTGTTCAACGTCGGGCGGCGCGAAGTCGGCGCGTTCCTGATCGCG
TCGGCGCTCGCGTGGGCGCACCGCTATCACGTCGACGGCATTCGCGTCGACGCCGTCGCGTCGATGCTCTACCGCGACTA
CTCGCGCGCGGCGGGCGAATGGGTGCCGAACGTGTACGGCGGGCGCGAGAACCTCGAATCGATCGCGTTCCTGAAGCACT
TCAACGACACGCTGCACGGGCCCGCCGCGCCGCCCGGCGTCGCGACGTTCGCGGAGGAATCGACCGCATGGCCCGGCGTC
ACCGCGCCGACCGCCGAGCACGGCCTCGGCTTCGATTTCAAGTGGAACATGGGCTGGATGCACGACACGCTCGCCTATCT
GCGCGAGGACCCGATCCATCGCCGCCATCACCACGACCGACTCACGTTCGGGCTCGTCTATGCGTTCTCCGAGCGCTTCG
TGCTGCCGCTGTCGCACGACGAAGTCGTGCACGGCAAGGGCTCGCTCGCGGCCAAGATGCCGGGCGACGCCTGGCAGCGC
CTCGCGAACCTGCGCGCGTACTTCGGCTTCATGTGGGCGCATCCGGGCAAGAAGCTGCTGTTCATGGGCGGCGAGTTCGC
GCAGTGGGGGGAGTTCGCGCACGACGCGACGCCGCAGTGGGATCTGCTCGACGCGCCCGCGCACCGGGGCGTGCAGCGCC
TCGTGCGCGACCTGAACCGGCTGCATGCGGCCGAGCCGGCGCTGCACGCGCTCGACGACCGGCCCGCCGGGTTCGCGTGG
CTCGTCGGCGACGATCGCAACAACAGCGTGTTCGCGTTCGTCCGTCGCGACGATGCGGGCCGCATGCTCGTCGCGGTGTG
CAACTTCACGCCGGTGCCGCGCACCGACTATCGGCTCGGGCTGCCCGCGCCGGGCCGCTGGGCCGAGGTGCTGAACACCG
ACGGCGCCGCATACGGCGGCACCGACGCGGGCAACGGCGGCGCGCTCCAAGCCGACGAGATTCCCGCGCACGGCGAGCGA
TGGTCGGCCGCGCTGCGCCTGCCGCCGCTCGCGACGCTATGGCTGCGCCCCGCCTGA

Upstream 100 bases:

>100_bases
CCGCGAACCGGCCGGACTGGCTGAGCGTGCCCGCAAACGGCCTCGCCGCGCTCGTCGCGCGCCTGATCGGCGGCGCCGCG
CCGCAGCAGGAGGACGCGCG

Downstream 100 bases:

>100_bases
CGCCGCGCGGCGCCCGCCGCACGCACGAACCGCCACGAGGAGGAGCACGACGATGCCGACACCCACGCCCGATCGCCTCG
AACCGGGGCGCAGCTATCCG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 738; Mature: 737

Protein sequence:

>738_residues
MTDAPFDRADIDALLDARHPDPFACLGPHRVGDATVVRTLLPGALRVRAIAAGGGVLGELRQVDPAGCFAGALPDGRERG
ERPRYRLSIDWPDARQDVEDAYAFGTLLDEDALARFAAGDPRAALACLGARALDMDGVPGVRFAVWAPGASRVSVVGDFN
GWDARRHPMRLRRPWGVWELFVPRIGAGERYKFALRARDGAALPLKADPCACRTEAPPRTASIVADLDALERFGWHDDAW
LRARASLDLAHAPVSIYEVHPESWLRVAAEGNRSATWDELAQRLIPYAAGMGFSHVELTPIAEYPFGGSWGYQSLSPFAP
SARFGPPEGFARFVEHAHAAGLGVIVDWVPAHFPDDPHGLGKFDGTALFEHADPREGWHPDWHTHVFNVGRREVGAFLIA
SALAWAHRYHVDGIRVDAVASMLYRDYSRAAGEWVPNVYGGRENLESIAFLKHFNDTLHGPAAPPGVATFAEESTAWPGV
TAPTAEHGLGFDFKWNMGWMHDTLAYLREDPIHRRHHHDRLTFGLVYAFSERFVLPLSHDEVVHGKGSLAAKMPGDAWQR
LANLRAYFGFMWAHPGKKLLFMGGEFAQWGEFAHDATPQWDLLDAPAHRGVQRLVRDLNRLHAAEPALHALDDRPAGFAW
LVGDDRNNSVFAFVRRDDAGRMLVAVCNFTPVPRTDYRLGLPAPGRWAEVLNTDGAAYGGTDAGNGGALQADEIPAHGER
WSAALRLPPLATLWLRPA

Sequences:

>Translated_738_residues
MTDAPFDRADIDALLDARHPDPFACLGPHRVGDATVVRTLLPGALRVRAIAAGGGVLGELRQVDPAGCFAGALPDGRERG
ERPRYRLSIDWPDARQDVEDAYAFGTLLDEDALARFAAGDPRAALACLGARALDMDGVPGVRFAVWAPGASRVSVVGDFN
GWDARRHPMRLRRPWGVWELFVPRIGAGERYKFALRARDGAALPLKADPCACRTEAPPRTASIVADLDALERFGWHDDAW
LRARASLDLAHAPVSIYEVHPESWLRVAAEGNRSATWDELAQRLIPYAAGMGFSHVELTPIAEYPFGGSWGYQSLSPFAP
SARFGPPEGFARFVEHAHAAGLGVIVDWVPAHFPDDPHGLGKFDGTALFEHADPREGWHPDWHTHVFNVGRREVGAFLIA
SALAWAHRYHVDGIRVDAVASMLYRDYSRAAGEWVPNVYGGRENLESIAFLKHFNDTLHGPAAPPGVATFAEESTAWPGV
TAPTAEHGLGFDFKWNMGWMHDTLAYLREDPIHRRHHHDRLTFGLVYAFSERFVLPLSHDEVVHGKGSLAAKMPGDAWQR
LANLRAYFGFMWAHPGKKLLFMGGEFAQWGEFAHDATPQWDLLDAPAHRGVQRLVRDLNRLHAAEPALHALDDRPAGFAW
LVGDDRNNSVFAFVRRDDAGRMLVAVCNFTPVPRTDYRLGLPAPGRWAEVLNTDGAAYGGTDAGNGGALQADEIPAHGER
WSAALRLPPLATLWLRPA
>Mature_737_residues
TDAPFDRADIDALLDARHPDPFACLGPHRVGDATVVRTLLPGALRVRAIAAGGGVLGELRQVDPAGCFAGALPDGRERGE
RPRYRLSIDWPDARQDVEDAYAFGTLLDEDALARFAAGDPRAALACLGARALDMDGVPGVRFAVWAPGASRVSVVGDFNG
WDARRHPMRLRRPWGVWELFVPRIGAGERYKFALRARDGAALPLKADPCACRTEAPPRTASIVADLDALERFGWHDDAWL
RARASLDLAHAPVSIYEVHPESWLRVAAEGNRSATWDELAQRLIPYAAGMGFSHVELTPIAEYPFGGSWGYQSLSPFAPS
ARFGPPEGFARFVEHAHAAGLGVIVDWVPAHFPDDPHGLGKFDGTALFEHADPREGWHPDWHTHVFNVGRREVGAFLIAS
ALAWAHRYHVDGIRVDAVASMLYRDYSRAAGEWVPNVYGGRENLESIAFLKHFNDTLHGPAAPPGVATFAEESTAWPGVT
APTAEHGLGFDFKWNMGWMHDTLAYLREDPIHRRHHHDRLTFGLVYAFSERFVLPLSHDEVVHGKGSLAAKMPGDAWQRL
ANLRAYFGFMWAHPGKKLLFMGGEFAQWGEFAHDATPQWDLLDAPAHRGVQRLVRDLNRLHAAEPALHALDDRPAGFAWL
VGDDRNNSVFAFVRRDDAGRMLVAVCNFTPVPRTDYRLGLPAPGRWAEVLNTDGAAYGGTDAGNGGALQADEIPAHGERW
SAALRLPPLATLWLRPA

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=646, Percent_Identity=26.625386996904, Blast_Score=178, Evalue=2e-44,
Organism=Escherichia coli, GI1789839, Length=733, Percent_Identity=51.4324693042292, Blast_Score=733, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=602, Percent_Identity=25.7475083056478, Blast_Score=158, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI32564391, Length=484, Percent_Identity=26.6528925619835, Blast_Score=138, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6320826, Length=622, Percent_Identity=25.5627009646302, Blast_Score=163, Evalue=8e-41,
Organism=Drosophila melanogaster, GI28573410, Length=613, Percent_Identity=28.5481239804241, Blast_Score=180, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_BURP0 (A3NU16)

Other databases:

- EMBL:   CP000572
- RefSeq:   YP_001065837.1
- ProteinModelPortal:   A3NU16
- STRING:   A3NU16
- GeneID:   4901737
- GenomeReviews:   CP000572_GR
- KEGG:   bpl:BURPS1106A_1566
- TIGR:   BURPS1106A_1566
- eggNOG:   COG0296
- HOGENOM:   HBG287139
- OMA:   DGTCLYE
- ProtClustDB:   PRK05402
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 81117; Mature: 80986

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: ACT_SITE 312-312 ACT_SITE 347-347 ACT_SITE 352-352 ACT_SITE 415-415 ACT_SITE 417-417 ACT_SITE 472-472 ACT_SITE 539-539 ACT_SITE 540-540

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPFDRADIDALLDARHPDPFACLGPHRVGDATVVRTLLPGALRVRAIAAGGGVLGEL
CCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHH
RQVDPAGCFAGALPDGRERGERPRYRLSIDWPDARQDVEDAYAFGTLLDEDALARFAAGD
HHCCCCHHEECCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHCCC
PRAALACLGARALDMDGVPGVRFAVWAPGASRVSVVGDFNGWDARRHPMRLRRPWGVWEL
CHHHHHHHCCHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCHHHH
FVPRIGAGERYKFALRARDGAALPLKADPCACRTEAPPRTASIVADLDALERFGWHDDAW
HCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
LRARASLDLAHAPVSIYEVHPESWLRVAAEGNRSATWDELAQRLIPYAAGMGFSHVELTP
HHHHHCCEECCCCEEEEEECCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
IAEYPFGGSWGYQSLSPFAPSARFGPPEGFARFVEHAHAAGLGVIVDWVPAHFPDDPHGL
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
GKFDGTALFEHADPREGWHPDWHTHVFNVGRREVGAFLIASALAWAHRYHVDGIRVDAVA
CCCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH
SMLYRDYSRAAGEWVPNVYGGRENLESIAFLKHFNDTLHGPAAPPGVATFAEESTAWPGV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCC
TAPTAEHGLGFDFKWNMGWMHDTLAYLREDPIHRRHHHDRLTFGLVYAFSERFVLPLSHD
CCCCHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHCCCCHHHHHEEECCCCEEEECCCC
EVVHGKGSLAAKMPGDAWQRLANLRAYFGFMWAHPGKKLLFMGGEFAQWGEFAHDATPQW
CEEECCCCEEECCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHCCCCCCC
DLLDAPAHRGVQRLVRDLNRLHAAEPALHALDDRPAGFAWLVGDDRNNSVFAFVRRDDAG
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCC
RMLVAVCNFTPVPRTDYRLGLPAPGRWAEVLNTDGAAYGGTDAGNGGALQADEIPAHGER
CEEEEEECCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCC
WSAALRLPPLATLWLRPA
CCEEEECCCCEEEEECCC
>Mature Secondary Structure 
TDAPFDRADIDALLDARHPDPFACLGPHRVGDATVVRTLLPGALRVRAIAAGGGVLGEL
CCCCCCHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHH
RQVDPAGCFAGALPDGRERGERPRYRLSIDWPDARQDVEDAYAFGTLLDEDALARFAAGD
HHCCCCHHEECCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHCCC
PRAALACLGARALDMDGVPGVRFAVWAPGASRVSVVGDFNGWDARRHPMRLRRPWGVWEL
CHHHHHHHCCHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCHHHH
FVPRIGAGERYKFALRARDGAALPLKADPCACRTEAPPRTASIVADLDALERFGWHDDAW
HCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
LRARASLDLAHAPVSIYEVHPESWLRVAAEGNRSATWDELAQRLIPYAAGMGFSHVELTP
HHHHHCCEECCCCEEEEEECCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
IAEYPFGGSWGYQSLSPFAPSARFGPPEGFARFVEHAHAAGLGVIVDWVPAHFPDDPHGL
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
GKFDGTALFEHADPREGWHPDWHTHVFNVGRREVGAFLIASALAWAHRYHVDGIRVDAVA
CCCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH
SMLYRDYSRAAGEWVPNVYGGRENLESIAFLKHFNDTLHGPAAPPGVATFAEESTAWPGV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCC
TAPTAEHGLGFDFKWNMGWMHDTLAYLREDPIHRRHHHDRLTFGLVYAFSERFVLPLSHD
CCCCHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHCCCCHHHHHEEECCCCEEEECCCC
EVVHGKGSLAAKMPGDAWQRLANLRAYFGFMWAHPGKKLLFMGGEFAQWGEFAHDATPQW
CEEECCCCEEECCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHCCCCCCC
DLLDAPAHRGVQRLVRDLNRLHAAEPALHALDDRPAGFAWLVGDDRNNSVFAFVRRDDAG
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCC
RMLVAVCNFTPVPRTDYRLGLPAPGRWAEVLNTDGAAYGGTDAGNGGALQADEIPAHGER
CEEEEEECCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCC
WSAALRLPPLATLWLRPA
CCEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA