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The map label for this gene is yphB [H]

Identifier: 126454779

GI number: 126454779

Start: 3386848

End: 3387921

Strand: Reverse

Name: yphB [H]

Synonym: BURPS1106A_3482

Alternate gene names: 126454779

Gene position: 3387921-3386848 (Counterclockwise)

Preceding gene: 126451580

Following gene: 126453904

Centisome position: 84.94

GC content: 73.0

Gene sequence:

>1074_bases
ATGACGGCGACGCATTCTCGTTCCACAGCCACCGATGCGGTGCAAACCTTGCAGACGCGCACCGCACGGCGCGCAGCCGC
CGCGCATCGGGTGAGCCCGGGGCCGCAGACGTCGCAGATCGCGCGCGGCGCGGGCGTCACCGAGACGGCGATCGCGACGC
TCTCGAACGACATGCTGCGGCTCGACGTCGCGCCGCACCTGGGCGGCGGCGTCACGCGCTTCGACTGGCGCGGCGACGGC
GCGCTCACGCCGATCTTCCGCCGTTGCGATGCGCCCGGCGCGCGCACCGATCCGAACGAGCTCGCGTGCTATTCGCTGCT
GCCGTATTCGAACCGGATCGGCGGCGGGCGCTTCGAGTGCGACGGGCGGCTCGTGCGCGTGCCGCGCAACCGCTCGGCCG
AGCCGCTGCCGATTCACGGCGACGGCTGGCTCGCGCACTGGCAACTCGACGATGCGACCGATACGCAGCTCGGCCTGTCG
CTCGATCGCAGCAACGGCGCGCCGTATGCGTATCGCGCGACGCAGGTCTACGCGCTCGACGGCGCGACGCTCACGATCGC
GCTCGGCATCGAGAACACGGGCGCGACGCGCCTGCCGTTCGGGCTCGGCGTGCATCCGTTCATCGTGCGCGACGCGTCGA
CCGAACTCGCGGCCGCCGCGAGCGGGCTGTGGCTGTCGACGCCCGACTGGCTGCCGTCGCGCCATGTCGGCGCGCCGCCC
GCGTGGCGCTTCGGCATCGCGTATCCGTTGCCGGACACGCTCGTCAATCACGCGTTCACCGGCTGGGGCGGCGGCGCGAC
GATCGCGTGGCCGCAGCGCCGGCTCGGGCTGACGGTCACGGCCGACGCCGATTGCTATGTGTTGTATACGCCGCCCGGCG
AGCCGTTCTTCTGCTTCGAGCCGGTCGATCACCCGATCGACGCGGTGAACCTGCCGGGCGGCGGCGCCGCGCACGGCATG
ACGCTGCTCGCGCCGGGCGAGCGCCTGATGCGGCGCTTTCGCTTCACCGTCGCGCGCACCGATGCGCGCGCGGCACCCGT
CGCCCGCCAATCGAGGCGGCGCGCGATCGCGTAG

Upstream 100 bases:

>100_bases
GACAGCCGGCTGATCACCGCGCAGGACGTTGTCGTCGACGGCGGCTGGGCATAGCATTCGTGCGGATGACCAAACGCGAC
GAAAGCAGGAGGACCGAATC

Downstream 100 bases:

>100_bases
CGGCGCGGCCGGCGCCGGCCGTGCGCAGTCGCGAGCGCCCGTCGCGACGCGGGTAAAATACGCGCCTTCCCAACCGCCAA
GCCGCGAGTGAGCGCCATGT

Product: aldose 1-epimerase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTATHSRSTATDAVQTLQTRTARRAAAAHRVSPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDG
ALTPIFRRCDAPGARTDPNELACYSLLPYSNRIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLS
LDRSNGAPYAYRATQVYALDGATLTIALGIENTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPP
AWRFGIAYPLPDTLVNHAFTGWGGGATIAWPQRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGM
TLLAPGERLMRRFRFTVARTDARAAPVARQSRRRAIA

Sequences:

>Translated_357_residues
MTATHSRSTATDAVQTLQTRTARRAAAAHRVSPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDG
ALTPIFRRCDAPGARTDPNELACYSLLPYSNRIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLS
LDRSNGAPYAYRATQVYALDGATLTIALGIENTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPP
AWRFGIAYPLPDTLVNHAFTGWGGGATIAWPQRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGM
TLLAPGERLMRRFRFTVARTDARAAPVARQSRRRAIA
>Mature_356_residues
TATHSRSTATDAVQTLQTRTARRAAAAHRVSPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDGA
LTPIFRRCDAPGARTDPNELACYSLLPYSNRIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLSL
DRSNGAPYAYRATQVYALDGATLTIALGIENTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPPA
WRFGIAYPLPDTLVNHAFTGWGGGATIAWPQRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGMT
LLAPGERLMRRFRFTVARTDARAAPVARQSRRRAIA

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=289, Percent_Identity=36.3321799307958, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1790311, Length=223, Percent_Identity=25.1121076233184, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 38304; Mature: 38172

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATHSRSTATDAVQTLQTRTARRAAAAHRVSPGPQTSQIARGAGVTETAIATLSNDMLR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCEEE
LDVAPHLGGGVTRFDWRGDGALTPIFRRCDAPGARTDPNELACYSLLPYSNRIGGGRFEC
EEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEE
DGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLSLDRSNGAPYAYRATQVYALD
CCEEEECCCCCCCCCCEECCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEEEC
GATLTIALGIENTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPP
CCEEEEEEEECCCCCEECCCCCCCCEEEEECCCCHHHHHHCCCEECCCCCCCCCCCCCCC
AWRFGIAYPLPDTLVNHAFTGWGGGATIAWPQRRLGLTVTADADCYVLYTPPGEPFFCFE
CEEEEEECCCHHHHHHHCCCCCCCCEEEECCHHHCCEEEECCCCEEEEECCCCCCEEEEC
PVDHPIDAVNLPGGGAAHGMTLLAPGERLMRRFRFTVARTDARAAPVARQSRRRAIA
CCCCCCCEEECCCCCHHCCEEEECCHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TATHSRSTATDAVQTLQTRTARRAAAAHRVSPGPQTSQIARGAGVTETAIATLSNDMLR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCEEE
LDVAPHLGGGVTRFDWRGDGALTPIFRRCDAPGARTDPNELACYSLLPYSNRIGGGRFEC
EEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEE
DGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLSLDRSNGAPYAYRATQVYALD
CCEEEECCCCCCCCCCEECCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEEEC
GATLTIALGIENTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPP
CCEEEEEEEECCCCCEECCCCCCCCEEEEECCCCHHHHHHCCCEECCCCCCCCCCCCCCC
AWRFGIAYPLPDTLVNHAFTGWGGGATIAWPQRRLGLTVTADADCYVLYTPPGEPFFCFE
CEEEEEECCCHHHHHHHCCCCCCCCEEEECCHHHCCEEEECCCCEEEEECCCCCCEEEEC
PVDHPIDAVNLPGGGAAHGMTLLAPGERLMRRFRFTVARTDARAAPVARQSRRRAIA
CCCCCCCEEECCCCCHHCCEEEECCHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]