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The map label for this gene is 126454754

Identifier: 126454754

GI number: 126454754

Start: 250697

End: 251209

Strand: Direct

Name: 126454754

Synonym: BURPS1106A_0267

Alternate gene names: NA

Gene position: 250697-251209 (Clockwise)

Preceding gene: 126454311

Following gene: 126453322

Centisome position: 6.29

GC content: 62.77

Gene sequence:

>513_bases
ATGCAGCGCCATCCGACCAAGATCGTATCGTCCGAACATCTCGTTTCCGAGACAAGCGCGGAGCTCTCCGAGCTCGAATA
TGCGCTCATCATGGCGGGAAATGCGTTCAATCGCTGGATGGTCCGGTGCATGGCGGCGGCCGGAGCGAAGGACATGACGG
CGGTCGAGGTGTCGCTGTTGCACCACGTGAGCCACCGGGACCGCAAGAAGAAGCTGGCTGACATTTGCTTCGTGCTCAAC
ATCGAGGACACGCACGTCGCGACGTATGCACTCAAGAAGCTGGTAGCTAGAGGGTACGTAAAAAGCGAAAAGACAGGCAA
GGAAGTGTTCTTTGACGCAACCGACGCGGGCCGCGCGCTGTGCCTCAGGTACCGCGACGTGCGCGAGCGCTGCCTGATCG
AGACCCTGAAGGACAGCGGGCTCACGAACGAGCAGATCGGCGACGCCGCGCAACTGCTGCGCCACGCGTCGGGGCTGTAC
GACACCGCGGCGCGCGCGGCCGCGTCGCTGTAG

Upstream 100 bases:

>100_bases
AAATGTCGATAACTTCTCGCCAAAAAAATCTGCCGCGGCGTCGCGCGGACGACTTTGGCGTACACTTTCGCGCACCTTCG
ACTCACCTCGCCGATCAGCC

Downstream 100 bases:

>100_bases
CGGCGGGGGCGCGAATCGGCTCAACGGCTCAACGGCTCAACGGCTCAACGGCGAAACGGCGAAACGGCGAAACGGCGAAA
CGGCGAAACGGCGCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLLHHVSHRDRKKKLADICFVLN
IEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRALCLRYRDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLY
DTAARAAASL

Sequences:

>Translated_170_residues
MQRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLLHHVSHRDRKKKLADICFVLN
IEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRALCLRYRDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLY
DTAARAAASL
>Mature_170_residues
MQRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLLHHVSHRDRKKKLADICFVLN
IEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRALCLRYRDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLY
DTAARAAASL

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18866; Mature: 18866

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHH
HHVSHRDRKKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRAL
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH
CLRYRDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLYDTAARAAASL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MQRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHH
HHVSHRDRKKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRAL
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH
CLRYRDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLYDTAARAAASL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA