| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454704
Identifier: 126454704
GI number: 126454704
Start: 2707397
End: 2708725
Strand: Direct
Name: 126454704
Synonym: BURPS1106A_2741
Alternate gene names: NA
Gene position: 2707397-2708725 (Clockwise)
Preceding gene: 126455320
Following gene: 126453461
Centisome position: 67.88
GC content: 71.86
Gene sequence:
>1329_bases TTGCGCGCGGACAACGCCGCGGCCGCGCAATCTTGTCGCAGCGCACGTGCGCGCTTCTTCTCCTATCATGCATCAAGAAA GCAACATATCGAAAAGGGGAACGTCATGCCGCTCGTCCGCTCGACGAACCACAGCCCGCTCGCGCCGCCCGACGGCCGCC ATGCCGCGCTATGGTCGACCGGCTTCCGGTCCTTCTATCTCGGCGGCGCCGGCTTCGGCGCGATCGCGATGCTCGCGTGG CTCGGCGCGCTCGCGGGCCACGATTCGGCCGGACGCGCGGCCCCCGCGAGCGGCCTGTTCTGGCACGCGCACGAAATGGT GTTCGGCTTCGGCGGCGCGATCGTGTCCGGCTTCCTGCTGACGTCGCTGCGCACCTGGACGTCGACGAATCCCGCGCAAG GCCCGTCGCTCGCCGCGCTGTGGCTGCTGTGGTTGGCCGGCCGCGTGCTGATGTGGACCGGGCCCGGCTGGGCCGCGGCC GCGGTCGACATCGCATTGCTGCCGGCGATCGCCTATGCGCTCGTTCGCGCGCTGATCGGCGCGAAAAATCGGCACGGCAT CTTCCTGCCCGTCGCGCTCGGCATGCTCGCCGCGCTCAACGCGCTCTTTCACCTGTGGATCCGGCAAGGCCACGCCGACT GGGCGCTGCGCTGCGTCGACCTCGCCGCCGGACTGCTCGTGCTCTTCATCGTCATCATCGGCGGGCGCATCATCCCGTCG ATCACGGCTACCGCGCGGCCCGAGTTGCCCGTCAGGCAGTGGCGGCTCGTCGAATCGTCGGTGATGTCGGTGACGCTCGC CGCGCTGCTCGCCGACGCGACGGGCGCGCCCGCACCCGCGATCGCCGCGCTCGCGGCGGCCGCCGCCGCGCTGCATGCCG CGCGGCTCGTCGGCTGGCGCTTCTGGGCGGTTGGGCGGCGGCCGATGCTGTCGATCCTGCACGTCGCCTACGCATCGATC GCCGCCGGCTTCGCGCTGACGGCCCTGAGCGCATACGGGTTCGTCGCGCACTCGCTCGCGCTGCACACGTTCACGACGGG CGCGATCGGCTGTGCGATCGTCGGGATGATCACGCGCACCGCGCTCGAGCACACGGGGCGAGAACCCGTCGCGAAGCTCG CCGAACGCATTTGCTACGGGCTGCTGATCGTCGCGACGCTCGCGCGCGTCGCGGGGCCCGCGCTCGCGCCCGCCGCGACC GCGCAATGGCTTGCCGTCGCGGGCATCAGCTGGACGGCCGCGCTGCTCGTCTATGTCGTGCGCTATGCCGGGCTTCTGAT GTCGCCGGCGCCCAGCGCGCCCGGCTCGGGCGCGCGCTCCGGCGGATAG
Upstream 100 bases:
>100_bases GGCATCGCGCTCGCGCGCCGTTCGGCGTCGCACCGCGGCGCCGGCAAGCGCGCCGCTTAGTCCGCCGCGTCCGCCGCGTC AACGCGCGGACGCGCGCGCC
Downstream 100 bases:
>100_bases CCCGATGCCGCGGCTCGGCGGCGCGCATCGCGTCCGCCGCGTGCGCGCTTGTCATACGCGGCGGTAGGCAGCCGCCGATC CGATCCCGCAGCGCGGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; NnrS-Like Protein; Asparagine Synthetase B; Nnrs Family Protein; NnrS Protein Superfamily
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MRADNAAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWSTGFRSFYLGGAGFGAIAMLAW LGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLLTSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAA AVDIALLPAIAYALVRALIGAKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWRFWAVGRRPMLSILHVAYASI AAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRTALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAAT AQWLAVAGISWTAALLVYVVRYAGLLMSPAPSAPGSGARSGG
Sequences:
>Translated_442_residues MRADNAAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWSTGFRSFYLGGAGFGAIAMLAW LGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLLTSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAA AVDIALLPAIAYALVRALIGAKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWRFWAVGRRPMLSILHVAYASI AAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRTALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAAT AQWLAVAGISWTAALLVYVVRYAGLLMSPAPSAPGSGARSGG >Mature_442_residues MRADNAAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWSTGFRSFYLGGAGFGAIAMLAW LGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLLTSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAA AVDIALLPAIAYALVRALIGAKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWRFWAVGRRPMLSILHVAYASI AAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRTALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAAT AQWLAVAGISWTAALLVYVVRYAGLLMSPAPSAPGSGARSGG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46004; Mature: 46004
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADNAAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEHHHHH GFRSFYLGGAGFGAIAMLAWLGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLL CCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAAAVDIALLPAIAYALVRALIG HHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC AKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FWAVGRRPMLSILHVAYASIAAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAATAQWLAVAGISWTAALLVYVV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH RYAGLLMSPAPSAPGSGARSGG HHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRADNAAAAQSCRSARARFFSYHASRKQHIEKGNVMPLVRSTNHSPLAPPDGRHAALWST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEHHHHH GFRSFYLGGAGFGAIAMLAWLGALAGHDSAGRAAPASGLFWHAHEMVFGFGGAIVSGFLL CCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TSLRTWTSTNPAQGPSLAALWLLWLAGRVLMWTGPGWAAAAVDIALLPAIAYALVRALIG HHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC AKNRHGIFLPVALGMLAALNALFHLWIRQGHADWALRCVDLAAGLLVLFIVIIGGRIIPS CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC ITATARPELPVRQWRLVESSVMSVTLAALLADATGAPAPAIAALAAAAAALHAARLVGWR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FWAVGRRPMLSILHVAYASIAAGFALTALSAYGFVAHSLALHTFTTGAIGCAIVGMITRT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEHTGREPVAKLAERICYGLLIVATLARVAGPALAPAATAQWLAVAGISWTAALLVYVV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH RYAGLLMSPAPSAPGSGARSGG HHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA