| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455320
Identifier: 126455320
GI number: 126455320
Start: 2706223
End: 2707356
Strand: Direct
Name: 126455320
Synonym: BURPS1106A_2740
Alternate gene names: NA
Gene position: 2706223-2707356 (Clockwise)
Preceding gene: 126451979
Following gene: 126454704
Centisome position: 67.85
GC content: 76.81
Gene sequence:
>1134_bases ATGCCCGCCGCCAAGCAACCGGCCGCTTCGCTCGCCCGCCCGCTCGTTCGCGCGACGGCGGGCGTCGTCATCGTCGCGCT GCTCGCGTGCGGCATCGCGACAGGCCTCGCGCGGCTCGGCGCGCCGGCGCCCCCGCATGCGGTATCGCGGCTCGCGTGGC ACGGCGTGCTGATAATTCCGGTATTCTTCGGCGCGGTGATCGGCGTCGAGCGCGCGGTCGCGCTCGGCGCGCGCTGGGCG TATCTCGTGCCCGCGACGGCCGCCGCGGCCGGCCTCTCGTTGCTCGCGGGCGCGCCGGCGATGCGCGCCGCCGCGCTGCT GACCGGCGCGGCGAGCATCGCGCTCGCCGTCAGCGCCACGGTGCTGCGGCGGCAAGCCGCGCTGTTCCTGTGGGTGCTCG CCGCGAGCGTCGGGTGCTGGTGGGCGGGCAACGCCGTCTGGCTGCTGACGGGCGATCCGTTCGCCGCCGTCGCGTGGTGG CTCGCGTTCCTGATCCTGACGATCGCCGCCGAGCGGCTCGAGCTCACGCGCGTGCGCCCGCTGCCGCGCGGCGCGAGCGC CTGCTTCTGCGGCATCGTCGCGCTGCTGCCGGCGGCCGCCGCGCTCGCGTCATGGCAGCCGCTGCCCGCGCTGCGGCTGT TCGGCGCGGGCGAGCTGCTGCTCGCGGCGTGGCTCGTGCGCTACGACGTCGCGCGCCGCACGGTGCGCCAGCGCGGCCTC ACGCGCTTCATCGCCGTCTGCCTGCTGTCCGGCTACGGGTGGCTCGCGGTGAGCGGCGCGCTCGGCCTGGACGGCGCGCT CGCGCCCGGCCATCCGGCGCACGACGCCGCGCTGCACGCGCTCACGCTCGGCTTCGTGTTTTCGATGATCCTCGGGCACA TGCCGATCATCGTGCCGGCCGTCGCGCGGCTGCGCGTCGCGTATCGGCCGTTCTTCTACGCGCCGCTCGCGCTCCTGCAC GCGGCCGTCGCGCTGCGCGTGGCGGGCGGCCTGCTCGATGCGTTCGCGCTCACGCGCGCGGGCGGCGAGATCGCCGCGCT CGCGATCGCGAGCTTCGCCGCCACGCTCGCGATCGGCATCGCGCTCGCGCGCCGTTCGGCGTCGCACCGCGGCGCCGGCA AGCGCGCCGCTTAG
Upstream 100 bases:
>100_bases GATGAGCGAGGCCGCGCGCGAGCAGATGGGCTGGCCGATCGCTTGACACATCGTTCACGCATCGTTCCCCCCCTCTGTCG CGCATCGCGCGCTCGACGCC
Downstream 100 bases:
>100_bases TCCGCCGCGTCCGCCGCGTCAACGCGCGGACGCGCGCGCCTTGCGCGCGGACAACGCCGCGGCCGCGCAATCTTGTCGCA GCGCACGTGCGCGCTTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPAAKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPPHAVSRLAWHGVLIIPVFFGAVIGVERAVALGARWA YLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSATVLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWW LAFLILTIAAERLELTRVRPLPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPAVARLRVAYRPFFYAPLALLH AAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGIALARRSASHRGAGKRAA
Sequences:
>Translated_377_residues MPAAKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPPHAVSRLAWHGVLIIPVFFGAVIGVERAVALGARWA YLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSATVLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWW LAFLILTIAAERLELTRVRPLPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPAVARLRVAYRPFFYAPLALLH AAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGIALARRSASHRGAGKRAA >Mature_376_residues PAAKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPPHAVSRLAWHGVLIIPVFFGAVIGVERAVALGARWAY LVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSATVLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWWL AFLILTIAAERLELTRVRPLPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGLT RFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPAVARLRVAYRPFFYAPLALLHA AVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGIALARRSASHRGAGKRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38666; Mature: 38535
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPPHAVSRLAWHGVLIIP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VFFGAVIGVERAVALGARWAYLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSAT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWWLAFLILTIAAERLELTRVRP HHHHHHHHHHHHHHHHHCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC LPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPA HHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VARLRVAYRPFFYAPLALLHAAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALARRSASHRGAGKRAA HHHHHHHHCCCCCCCCC >Mature Secondary Structure PAAKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPPHAVSRLAWHGVLIIP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VFFGAVIGVERAVALGARWAYLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSAT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWWLAFLILTIAAERLELTRVRP HHHHHHHHHHHHHHHHHCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC LPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPA HHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VARLRVAYRPFFYAPLALLHAAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALARRSASHRGAGKRAA HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA