Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 126454654

GI number: 126454654

Start: 3726290

End: 3726847

Strand: Reverse

Name: nusG [H]

Synonym: BURPS1106A_3821

Alternate gene names: 126454654

Gene position: 3726847-3726290 (Counterclockwise)

Preceding gene: 126455126

Following gene: 126453465

Centisome position: 93.44

GC content: 60.22

Gene sequence:

>558_bases
ATGAGCGATACTCCGGCATCCCCGAGCGGAAAACGTTGGTACGTCGTGCACGCCTACTCCGGTATGGAGAAGAGCGTGCA
ACGCGCGCTTCAAGAGCGGATCGAACGTGCCGGCATGCAGGACAAGTTCGGCCAGATCCTGGTTCCGACCGAGGAAGTGG
TTGAAGTCAAGGGCGGTCACAAGGCGGTGACCGAACGTCGTTTCTTCCCCGGCTACGTGCTGGTCGAAATGGAAATGACG
GACGAAACGTGGCACCTCGTGAAGAACACGGCGAAGGTCACCGGTTTCGTCGGCGGGGCGCGCAATCGCCCGAGCCCGAT
TTCCCCGCGGGAAGTCGAGAAGATCATGTCGCAGATGCAGGAAGGCGTGGAGAAGCCGCGCCCGAAGACCCTGTTCGAAG
TCGGCGAGATGGTGCGCGTGAAGGAAGGCCCGTTCACGGACTTCAACGGCACGGTCGAGGAAGTGAACTACGAAAAATCG
AGGGTTCGCGTGTCGGTCACCATCTTCGGTCGCGCGACGCCGGTCGAATTGGAATTCGGCCAGGTCGAAAAGGTTTGA

Upstream 100 bases:

>100_bases
GTCGTCTTCGGATTTGTGCTGGTCATGGCGCTCTTTCTCTGGATAAGCGATAAATCCATCGAATGGGCGATTTTCTCGGT
GATTCTGGGTTGGAAATGAT

Downstream 100 bases:

>100_bases
GCAAGTTCAGGTGGGCCGCTCCGAGAGCGGCCCACCTTCGCGCTTACGGCCCGCGTTAATGGCCGTTGAGGAGCGCAAGT
AGTCGCAGGACGAACCCGCG

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSDTPASPSGKRWYVVHAYSGMEKSVQRALQERIERAGMQDKFGQILVPTEEVVEVKGGHKAVTERRFFPGYVLVEMEMT
DETWHLVKNTAKVTGFVGGARNRPSPISPREVEKIMSQMQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGTVEEVNYEKS
RVRVSVTIFGRATPVELEFGQVEKV

Sequences:

>Translated_185_residues
MSDTPASPSGKRWYVVHAYSGMEKSVQRALQERIERAGMQDKFGQILVPTEEVVEVKGGHKAVTERRFFPGYVLVEMEMT
DETWHLVKNTAKVTGFVGGARNRPSPISPREVEKIMSQMQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGTVEEVNYEKS
RVRVSVTIFGRATPVELEFGQVEKV
>Mature_184_residues
SDTPASPSGKRWYVVHAYSGMEKSVQRALQERIERAGMQDKFGQILVPTEEVVEVKGGHKAVTERRFFPGYVLVEMEMTD
ETWHLVKNTAKVTGFVGGARNRPSPISPREVEKIMSQMQEGVEKPRPKTLFEVGEMVRVKEGPFTDFNGTVEEVNYEKSR
VRVSVTIFGRATPVELEFGQVEKV

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=184, Percent_Identity=60.8695652173913, Blast_Score=238, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20921; Mature: 20790

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPASPSGKRWYVVHAYSGMEKSVQRALQERIERAGMQDKFGQILVPTEEVVEVKGGH
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHEECCCC
KAVTERRFFPGYVLVEMEMTDETWHLVKNTAKVTGFVGGARNRPSPISPREVEKIMSQMQ
HHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHH
EGVEKPRPKTLFEVGEMVRVKEGPFTDFNGTVEEVNYEKSRVRVSVTIFGRATPVELEFG
HHHHCCCCHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCEEEECC
QVEKV
CCCCC
>Mature Secondary Structure 
SDTPASPSGKRWYVVHAYSGMEKSVQRALQERIERAGMQDKFGQILVPTEEVVEVKGGH
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHEECCCC
KAVTERRFFPGYVLVEMEMTDETWHLVKNTAKVTGFVGGARNRPSPISPREVEKIMSQMQ
HHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHH
EGVEKPRPKTLFEVGEMVRVKEGPFTDFNGTVEEVNYEKSRVRVSVTIFGRATPVELEFG
HHHHCCCCHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCEEEECC
QVEKV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]