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The map label for this gene is secE [H]

Identifier: 126455126

GI number: 126455126

Start: 3726849

End: 3727229

Strand: Reverse

Name: secE [H]

Synonym: BURPS1106A_3822

Alternate gene names: 126455126

Gene position: 3727229-3726849 (Counterclockwise)

Preceding gene: 126453973

Following gene: 126454654

Centisome position: 93.45

GC content: 55.91

Gene sequence:

>381_bases
ATGGCGAATCCTTCCGTCGAAACTGTTAATACCTCCGGCGATAAGCTGATGCTGGCCCTGGGTGTATTGTTGGTCTTGGC
CGGATTTGCGGGCTTCTTCTTGCTGGGTGGCAAGGAGTGGTATGTCCGCGGCGCTGCGTTGGCAGTGGGGGTGATCGCCG
GTGTGGGCGTCGCGCTGATGTCGCTTCCTGGCAAGAGCTTCATTGCTTTTGCGAAGGATTCGTATCGCGAAGTGCGCAAA
GTCGTCTGGCCCACGCGCAAGGAAGCCACGCAAACCACGCTCGTCGTCTTCGGATTTGTGCTGGTCATGGCGCTCTTTCT
CTGGATAAGCGATAAATCCATCGAATGGGCGATTTTCTCGGTGATTCTGGGTTGGAAATGA

Upstream 100 bases:

>100_bases
GCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATTCCCTCTGCCCCTGCCACATAAGCCACGTTCTTCTACGT
GGCGTTTGTTTTAGAGTGTT

Downstream 100 bases:

>100_bases
TATGAGCGATACTCCGGCATCCCCGAGCGGAAAACGTTGGTACGTCGTGCACGCCTACTCCGGTATGGAGAAGAGCGTGC
AACGCGCGCTTCAAGAGCGG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MANPSVETVNTSGDKLMLALGVLLVLAGFAGFFLLGGKEWYVRGAALAVGVIAGVGVALMSLPGKSFIAFAKDSYREVRK
VVWPTRKEATQTTLVVFGFVLVMALFLWISDKSIEWAIFSVILGWK

Sequences:

>Translated_126_residues
MANPSVETVNTSGDKLMLALGVLLVLAGFAGFFLLGGKEWYVRGAALAVGVIAGVGVALMSLPGKSFIAFAKDSYREVRK
VVWPTRKEATQTTLVVFGFVLVMALFLWISDKSIEWAIFSVILGWK
>Mature_125_residues
ANPSVETVNTSGDKLMLALGVLLVLAGFAGFFLLGGKEWYVRGAALAVGVIAGVGVALMSLPGKSFIAFAKDSYREVRKV
VWPTRKEATQTTLVVFGFVLVMALFLWISDKSIEWAIFSVILGWK

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=70, Percent_Identity=45.7142857142857, Blast_Score=66, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13628; Mature: 13497

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPSVETVNTSGDKLMLALGVLLVLAGFAGFFLLGGKEWYVRGAALAVGVIAGVGVALM
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SLPGKSFIAFAKDSYREVRKVVWPTRKEATQTTLVVFGFVLVMALFLWISDKSIEWAIFS
HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VILGWK
HHHCCC
>Mature Secondary Structure 
ANPSVETVNTSGDKLMLALGVLLVLAGFAGFFLLGGKEWYVRGAALAVGVIAGVGVALM
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SLPGKSFIAFAKDSYREVRKVVWPTRKEATQTTLVVFGFVLVMALFLWISDKSIEWAIFS
HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VILGWK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]