| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is purK [H]
Identifier: 126454636
GI number: 126454636
Start: 824525
End: 825721
Strand: Direct
Name: purK [H]
Synonym: BURPS1106A_0844
Alternate gene names: 126454636
Gene position: 824525-825721 (Clockwise)
Preceding gene: 126454425
Following gene: 126453889
Centisome position: 20.67
GC content: 71.6
Gene sequence:
>1197_bases ATGACTGCACTCCCCACCCCGAATTCCCCGATCCTGCCGGGCGCCTGGCTCGGCATGGTCGGCGGCGGCCAGCTCGGCCG CATGTTCTGCTTTGCCGCGCAAGCGATGGGCTACCGCGTCGCCGTGCTCGATCCCGATCCGACGAGCCCCGCGGGCGCCG TCGCCGACAAGCATCTGCGCGCCGCGTACGACGACGAGGCCGCGCTCGCCGAGCTCGCGCAATTGTGCGATGCCGTATCG ACCGAATTCGAGAACGTGCCCGCCGCGAGCCTCGAGCTGCTCGCGCAATCGACGTTCGTCGCGCCGGCCGGCCGGTGCGT CGCGATCGCGCAGGACCGGATCGCCGAGAAACGATTCATCGCGGCGTCGGGCGTGCCCGTCGCGCCGCACGTCGTGATCG AATCGCACGCGCAGCTCGCCGCGCTCGCCGATGCGGACCTCGCCGCGGTGCTGCCCGGCATCCTGAAGACCGCGCGTCTC GGTTACGACGGCAAGGGGCAGGTGCGTGTCGCGACGGTGCGCGAGGCGCGCGACGCGTACGCGTCGCTCGGCGGCGTGCC TTGCGTGCTCGAGAAGCGCCTGCCGCTCGAATACGAGGTGTCGGCGCTGATCGCGCGCGGCGCGAACGGCGCGTCGGCGG TGTTTCCGCTCGCGCAGAACACGCACCACGGCGGCATCCTGTCGCTGAGCGTCGTGCCTGCGCCCGCCGCGAGCGATGCG CTCGTGCGCGAAGCGCAGCAGGCGGCCGTGCGGATCGCCGATTCGCTCGGCTACGTCGGCGTGCTGTGCGTCGAGTTCTT CGTGCTCGAAGACGGCTCGCTCGTCGCGAACGAAATGGCGCCGCGCCCGCACAACTCCGGCCATTACACGGTCGACGCGT GCGAGACGAGCCAGTTCGAGCAGCAGGTGCGCGCGATGACGCGGCTGCCGCTCGGCAGCACGCGCCAGCATTCGCCCGCC GCGATGCTCAACGTGCTCGGCGACGTGTGGTTCGCGAACGGCGTGTCGGGTGAACCCGTCACGCCGCCGTGGGACGAGGT CGCCGCGATGCCGACCGCGCGGCTGCATCTGTACGGCAAGGAAGAGGCGCGCGCCGGCCGCAAGATGGGCCATGTGAACT TCACCGCGGCGACGCGCGACGAAGCGGTCGCCGGCGCGACCGCGTGCGCGCGGCTGTTGCGCATTGCGCTCGACTGA
Upstream 100 bases:
>100_bases ATGGCGCTGCCGCCGCTGTGAGGCCGCCGCGCGAGCCGCTTGCAACATCGATTGTCCTGACCGCGGCGGGCGCCGCCGCC CGCCGCCACCGACCCTAGAC
Downstream 100 bases:
>100_bases CGGAGCGCGCGATGTCGAACGATCGACCCTTCCCGAGCGCCGAGGCCATCGAGGACGCGGCCGCGCGGCTCGATGCGGGC GAGCTCGTCGCGTTTCCGAC
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTALPTPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLRAAYDDEAALAELAQLCDAVS TEFENVPAASLELLAQSTFVAPAGRCVAIAQDRIAEKRFIAASGVPVAPHVVIESHAQLAALADADLAAVLPGILKTARL GYDGKGQVRVATVREARDAYASLGGVPCVLEKRLPLEYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA LVREAQQAAVRIADSLGYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFEQQVRAMTRLPLGSTRQHSPA AMLNVLGDVWFANGVSGEPVTPPWDEVAAMPTARLHLYGKEEARAGRKMGHVNFTAATRDEAVAGATACARLLRIALD
Sequences:
>Translated_398_residues MTALPTPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLRAAYDDEAALAELAQLCDAVS TEFENVPAASLELLAQSTFVAPAGRCVAIAQDRIAEKRFIAASGVPVAPHVVIESHAQLAALADADLAAVLPGILKTARL GYDGKGQVRVATVREARDAYASLGGVPCVLEKRLPLEYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA LVREAQQAAVRIADSLGYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFEQQVRAMTRLPLGSTRQHSPA AMLNVLGDVWFANGVSGEPVTPPWDEVAAMPTARLHLYGKEEARAGRKMGHVNFTAATRDEAVAGATACARLLRIALD >Mature_397_residues TALPTPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLRAAYDDEAALAELAQLCDAVST EFENVPAASLELLAQSTFVAPAGRCVAIAQDRIAEKRFIAASGVPVAPHVVIESHAQLAALADADLAAVLPGILKTARLG YDGKGQVRVATVREARDAYASLGGVPCVLEKRLPLEYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDAL VREAQQAAVRIADSLGYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFEQQVRAMTRLPLGSTRQHSPAA MLNVLGDVWFANGVSGEPVTPPWDEVAAMPTARLHLYGKEEARAGRKMGHVNFTAATRDEAVAGATACARLLRIALD
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=379, Percent_Identity=32.4538258575198, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1788155, Length=388, Percent_Identity=25.2577319587629, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324702, Length=376, Percent_Identity=32.4468085106383, Blast_Score=195, Evalue=8e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006115 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp; PF03446 NAD_binding_2 [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 41597; Mature: 41466
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPTPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLR CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH AAYDDEAALAELAQLCDAVSTEFENVPAASLELLAQSTFVAPAGRCVAIAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHEE AASGVPVAPHVVIESHAQLAALADADLAAVLPGILKTARLGYDGKGQVRVATVREARDAY EECCCCCCCHHEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH ASLGGVPCVLEKRLPLEYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA HHHCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHH LVREAQQAAVRIADSLGYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFE HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEECCCHHHHH QQVRAMTRLPLGSTRQHSPAAMLNVLGDVWFANGVSGEPVTPPWDEVAAMPTARLHLYGK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECC EEARAGRKMGHVNFTAATRDEAVAGATACARLLRIALD HHHHHCHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TALPTPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLR CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH AAYDDEAALAELAQLCDAVSTEFENVPAASLELLAQSTFVAPAGRCVAIAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHEE AASGVPVAPHVVIESHAQLAALADADLAAVLPGILKTARLGYDGKGQVRVATVREARDAY EECCCCCCCHHEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH ASLGGVPCVLEKRLPLEYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA HHHCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHH LVREAQQAAVRIADSLGYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFE HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEECCCHHHHH QQVRAMTRLPLGSTRQHSPAAMLNVLGDVWFANGVSGEPVTPPWDEVAAMPTARLHLYGK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECC EEARAGRKMGHVNFTAATRDEAVAGATACARLLRIALD HHHHHCHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]