| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454629
Identifier: 126454629
GI number: 126454629
Start: 929977
End: 930432
Strand: Direct
Name: 126454629
Synonym: BURPS1106A_0950
Alternate gene names: NA
Gene position: 929977-930432 (Clockwise)
Preceding gene: 126453301
Following gene: 126452797
Centisome position: 23.32
GC content: 72.81
Gene sequence:
>456_bases GTGGCGTCGAACGCGGCGGCGGGGCTCGCTGGCGCCGAACGCGGCCGTGCGCGCAGCGATGCGGCGCGCGTTCGCGACGT TTCGCCGCGAACGGTACCGACATCGACGCTCGCGCGCCGGCGAGCCGAGGCCTCATCCCGTCACCGGGCTTTACGAGACG CGCGACGCAACGATGGATTCAATGAGACGCGAATTTTCTGCCACCCTTGCGGCGTGCGCTTTACGCGCTCGGTCGTGACG AAGCGCGGGTGGGGCGGCCGTGCGCGGCTCGGACGGCGAAGCGCCCGCATCGCCGTTCGGCGCGGCGAGCTGTGCGTGAC GTGCGGCTACGCAGACGCCGTCGGCGGCGCCGCCGCGCTTTTTCGTACGGCCTCGCGCCGCTCGGCCGCGATGCGCCGCG CGGGGCGCCGCGATGCGCGCGCCGCCTATTTGCGCAGTTCGACGACGAAATCGTAG
Upstream 100 bases:
>100_bases GCGGCCGCTCGCGGGGGCGATCCGGCCGTGCGCGAACGCGTCGAGTTCGACCGGCGGCGATCCGTGCCGGCCGTCGATTC GGCGAGTCGGCACGCTTGCC
Downstream 100 bases:
>100_bases TAATCGTTTCGACAGTATGTGTCGGTGAGTTCGATCGCGCGCTGATCGTGCGTGAAGCCGATCCGGGTGATCAAAAGGAG CGCGTCGTGCGGCGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MASNAAAGLAGAERGRARSDAARVRDVSPRTVPTSTLARRRAEASSRHRALRDARRNDGFNETRIFCHPCGVRFTRSVVT KRGWGGRARLGRRSARIAVRRGELCVTCGYADAVGGAAALFRTASRRSAAMRRAGRRDARAAYLRSSTTKS
Sequences:
>Translated_151_residues MASNAAAGLAGAERGRARSDAARVRDVSPRTVPTSTLARRRAEASSRHRALRDARRNDGFNETRIFCHPCGVRFTRSVVT KRGWGGRARLGRRSARIAVRRGELCVTCGYADAVGGAAALFRTASRRSAAMRRAGRRDARAAYLRSSTTKS >Mature_150_residues ASNAAAGLAGAERGRARSDAARVRDVSPRTVPTSTLARRRAEASSRHRALRDARRNDGFNETRIFCHPCGVRFTRSVVTK RGWGGRARLGRRSARIAVRRGELCVTCGYADAVGGAAALFRTASRRSAAMRRAGRRDARAAYLRSSTTKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16390; Mature: 16259
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNAAAGLAGAERGRARSDAARVRDVSPRTVPTSTLARRRAEASSRHRALRDARRNDGF CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NETRIFCHPCGVRFTRSVVTKRGWGGRARLGRRSARIAVRRGELCVTCGYADAVGGAAAL CCCEEEEECCCCHHHHHHHHHCCCCCHHHHCCHHHHEEEECCCEEEEECCHHHHHHHHHH FRTASRRSAAMRRAGRRDARAAYLRSSTTKS HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure ASNAAAGLAGAERGRARSDAARVRDVSPRTVPTSTLARRRAEASSRHRALRDARRNDGF CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NETRIFCHPCGVRFTRSVVTKRGWGGRARLGRRSARIAVRRGELCVTCGYADAVGGAAAL CCCEEEEECCCCHHHHHHHHHCCCCCHHHHCCHHHHEEEECCCEEEEECCHHHHHHHHHH FRTASRRSAAMRRAGRRDARAAYLRSSTTKS HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA