Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is yusP [H]

Identifier: 126454616

GI number: 126454616

Start: 642836

End: 644431

Strand: Direct

Name: yusP [H]

Synonym: BURPS1106A_0669

Alternate gene names: 126454616

Gene position: 642836-644431 (Clockwise)

Preceding gene: 126452468

Following gene: 126453518

Centisome position: 16.12

GC content: 69.49

Gene sequence:

>1596_bases
ATGGCTGTCCATACCGCCGCCCACCATTCGAGCGGGCAAGTCCTTCCGTTTCGCGAGTCGCTGCTCGCGATGCTCGGCAT
CTCCTTCGTCACGATGCTCGTCGCGCTCGACCAGACCGTCGTCGGCACCGCGCTGCCGACGATCGTCGCCGAGCTGCGCG
GCTTCGATCTGTACGCGTGGGTCGCCACGTCGTACCTGCTCGCGTCGGTGATCACCGTGCCGATCTTCGGGCGGCTCGGC
GATTACTACGGGCGCAAGCCGTTCGTGATCGCGTCGCTCGTCGTGTTCACGGGCGCGTCGGTGCTGTGCGCGATGGCGCA
GGACATGCTGTCGCTCGTGCTCGCGCGCGGCTTGCAGGGGATCGGCGGCGGGATGCTCGTCGGCACCGCGTTCGCGTGCA
TTCCGGATCTCTTCCCCGATTCGGTCGTGCGGCTGCGCTGGCAGGTGCTGATGAGCTCGGCGTTCGGGATCGCGAACGCG
GTCGGCCCGTCGCTCGGCGGCGTGCTCACGCAGAATTACGGCTGGCGCGCGGTGTTCTACGTGAATCTGCCGGTGGGCCT
GCTGTCGATCTTCTTCGTCTGGCGCTATCTGCCGCACATGCGGCACGTCGAGCACACGCGGAAGATGCGGCTCGACTGGC
CGGGCGCGCTCCTCATCGCCGTGACGCTCGGCGCGATGCAGCTGTTCGTCGAATGGCTGCCGAAATACGGAATCGGCGGC
TGGCCGACGCTGCTGCTCGTCGCCGCGCTCGCGGGCGGCGTCGCGCTGTGGCGCTGGGAGAAGCGCTGCGCGCAGCCGAT
CCTGCCGTTCGACATGTTCTCGAACCGCGCGCTGTCCACGCTGTTCATCCTCGCGATCCTCGCCGGCTTCGCGATGTTCT
CGCTGCTCTTCTACGCGCCGCTGCTGTTCCAGGGCGGCTTCGGGATGTCGCCGCAGCAGGCGGGCGTCGTCATCACGCCG
CTCGTCGTGTTCATCACGATCGGCAGCATCATGAACGGCCGCGTGATCACGCGGATCCGCCGTCCGAACGCGATGCTGTA
CGTCGGCTTCCTGCTGTTCGCGCTCGCGTGCGCGGGCGTCGTCGCGTCGACGCATGCGACGCCGGGCTGGGCGCTGATGG
CGCTGATGGTCGCGGGCGGCGTGGGCCTCGGCTTCGTGCTGCCGAACCTGACCGTGTTCGCGCAGCAGACGGCGGGCCGC
GAGCATCTCGGGATCGCGACCGCGCTGCTGCAGTCGCTGCGCATGGTGGGCGGCATGCTCGGCACGGCACTCACCGGCAC
GCTCGTCAATCAGCTCTACGCGAACGGCGTGCGCGACGCGCTCGCCGCGGACGGCGCGTTGCGCTGGCAGGCACGCCTTG
CCGATCCTCAGGTGCTGATCGACCGCGCCGCGCAGTCGCGCGTGGTGGACGAACTCGTGCGCGCCGGGCATCATGGCGCC
CATTTGCTCGAAGCGGCGCGCGAATCGCTCGTCGGCGCGATCCATATCGGCATCGGCGTCGGCGCGTTCGTCGCGCTCGC
GGCGGTGTGGCAAAGCCGCTGCGTGCCGCCCGTCGAGCTGCGCCGCAAGCTCGAGCCGGCCGTCCTCGCCGAGTGA

Upstream 100 bases:

>100_bases
CCTTCGCGACGCGCGCGTCGCATGGTGGCGCCGGCTAGATTACCTGATGCATGATAGAATTTTCGATTCGTTGACGCATC
AAAAGTTGCACGAACAAAAG

Downstream 100 bases:

>100_bases
GCGCCGTCTCGTCCCCTCATTCACGCATATCGGAGCCGAAGCCAGCGCATGGAAGAACAGGACCGCATCGCGATCTTGCA
GCAGTTCGGGCGCACGTACC

Product: putative multidrug transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLASVITVPIFGRLG
DYYGRKPFVIASLVVFTGASVLCAMAQDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANA
VGPSLGGVLTQNYGWRAVFYVNLPVGLLSIFFVWRYLPHMRHVEHTRKMRLDWPGALLIAVTLGAMQLFVEWLPKYGIGG
WPTLLLVAALAGGVALWRWEKRCAQPILPFDMFSNRALSTLFILAILAGFAMFSLLFYAPLLFQGGFGMSPQQAGVVITP
LVVFITIGSIMNGRVITRIRRPNAMLYVGFLLFALACAGVVASTHATPGWALMALMVAGGVGLGFVLPNLTVFAQQTAGR
EHLGIATALLQSLRMVGGMLGTALTGTLVNQLYANGVRDALAADGALRWQARLADPQVLIDRAAQSRVVDELVRAGHHGA
HLLEAARESLVGAIHIGIGVGAFVALAAVWQSRCVPPVELRRKLEPAVLAE

Sequences:

>Translated_531_residues
MAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLASVITVPIFGRLG
DYYGRKPFVIASLVVFTGASVLCAMAQDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANA
VGPSLGGVLTQNYGWRAVFYVNLPVGLLSIFFVWRYLPHMRHVEHTRKMRLDWPGALLIAVTLGAMQLFVEWLPKYGIGG
WPTLLLVAALAGGVALWRWEKRCAQPILPFDMFSNRALSTLFILAILAGFAMFSLLFYAPLLFQGGFGMSPQQAGVVITP
LVVFITIGSIMNGRVITRIRRPNAMLYVGFLLFALACAGVVASTHATPGWALMALMVAGGVGLGFVLPNLTVFAQQTAGR
EHLGIATALLQSLRMVGGMLGTALTGTLVNQLYANGVRDALAADGALRWQARLADPQVLIDRAAQSRVVDELVRAGHHGA
HLLEAARESLVGAIHIGIGVGAFVALAAVWQSRCVPPVELRRKLEPAVLAE
>Mature_530_residues
AVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLASVITVPIFGRLGD
YYGRKPFVIASLVVFTGASVLCAMAQDMLSLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAV
GPSLGGVLTQNYGWRAVFYVNLPVGLLSIFFVWRYLPHMRHVEHTRKMRLDWPGALLIAVTLGAMQLFVEWLPKYGIGGW
PTLLLVAALAGGVALWRWEKRCAQPILPFDMFSNRALSTLFILAILAGFAMFSLLFYAPLLFQGGFGMSPQQAGVVITPL
VVFITIGSIMNGRVITRIRRPNAMLYVGFLLFALACAGVVASTHATPGWALMALMVAGGVGLGFVLPNLTVFAQQTAGRE
HLGIATALLQSLRMVGGMLGTALTGTLVNQLYANGVRDALAADGALRWQARLADPQVLIDRAAQSRVVDELVRAGHHGAH
LLEAARESLVGAIHIGIGVGAFVALAAVWQSRCVPPVELRRKLEPAVLAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. EmrB family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=437, Percent_Identity=27.9176201372998, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1790195, Length=310, Percent_Identity=27.741935483871, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789042, Length=417, Percent_Identity=25.6594724220624, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1788710, Length=414, Percent_Identity=25.1207729468599, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788392, Length=324, Percent_Identity=28.0864197530864, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1790146, Length=170, Percent_Identity=30.5882352941176, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319770, Length=399, Percent_Identity=24.0601503759398, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6323735, Length=326, Percent_Identity=24.5398773006135, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6322958, Length=493, Percent_Identity=22.5152129817444, Blast_Score=85, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325455, Length=154, Percent_Identity=31.1688311688312, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321663, Length=183, Percent_Identity=30.0546448087432, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004638
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 56863; Mature: 56732

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCC
>Mature Secondary Structure 
AVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]