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The map label for this gene is ctaA [H]

Identifier: 126454556

GI number: 126454556

Start: 478592

End: 479701

Strand: Direct

Name: ctaA [H]

Synonym: BURPS1106A_0516

Alternate gene names: 126454556

Gene position: 478592-479701 (Clockwise)

Preceding gene: 126451906

Following gene: 126453695

Centisome position: 12.0

GC content: 68.74

Gene sequence:

>1110_bases
ATGTATCTATTGCAACTCGGCCTGATCGGCCTCTGCATCGCGCTGCTGCCGCTGTCGTACGTGTGGGTGAAGGCGGACGA
CGACAAGTTCCGCAAGCTCGTCTGGATCACGACGTTCCTCACGCTCGATCTCGTGATGTTCGGCGGCTTCACGCGCCTGA
CCGATTCGGGGCTCGGCTGCCCGGACTGGCCGGGCTGCTACGGCACGTCGTCGCCGTTCATCGCGCACGCGGCGATCACG
GCCGCCCATCAGGCGATGCCCACGGGCCCCGTCAGCATGACGAAGGCATGGATCGAGATGATCCACCGCTATTTCGCGAT
GGCGATCGGCGTGCTGATCATCGCGCAGACGGTGATCGCGTGGGCCGCGCGGCTGCGCCGCAAGCCGCTGCACGTCTCGC
CGTGGTGGCCGACGAGCCTGCTGCTGCTGATCCTCGTGCAGGGCGCGTTCGGCGCGTGGACCGTGACGATGAAGCTGCAG
CCGGTGATCGTGACGATCCATCTGCTGCTCGGCCTGACGCTGCTCGGCACGCTCGGCTGGCTCGCCGCGCGGCAGACGCC
GCTGCCGGCGCACGAGCCCGGCGCGGGCCGCTACCGCGCGGCGGCGCTCGCCGCGCTCATGCTGCTCGTCGTGCAGATCG
CGCTCGGCGGCTGGGTCAGCACGAACTACGCGGTGCTCGCGTGCACCGATTTCCCGACCTGCAACGGCGCGTGGATTCCG
CCGATGGACTTTCGCAACGGCTTTCATCTCTGGCGCGCGCTCGGGATGACGAACGACGGCGACGCGATCACGCAGGACGC
GCTCGTCGCGATCCACTGGACGCACCGCACGTTCGCGTTCGTCGTCGTCGCGTACCTGGCCGCGTTCGCGCTGAAGATGC
GCCGCTTCGCGTCGCTGCGGCGCCCGGCGAACGGCGTGCTCGCCGTCGTCGTGCTGCAGTTCGTCACGGGCTTGACGAAT
ATCGTGCTGCAATGGCCTTTGCCCGTCGCCGTCGCGCACAACGGCGGGGCCGCGATCCTGCTGCTGCTCGTCGTCATGCT
AAACTTTCGCATCCTTTCAAGCCGTCCCGGCCGCGTCGCGCAACCCGCGCGCGACGCCGCGCCCGCGTGA

Upstream 100 bases:

>100_bases
CCGAGCAGGATCAAGCAGGACGTGACGAAGCTGCTCAAGTGGTCGAGCATCGGTTGAACGCCGGCCCGGGCCGGCGATAG
ACGGTAAGAGAGAAACACGG

Downstream 100 bases:

>100_bases
CGTTGACCGTACATGGACACGACACTCTCCCATACGCCCGGTAGCCGTCTCTCCCAGTATCTGGCGCTGACGAAGCCGCG
CGTCACGCAGCTCGCCGTGT

Product: cytochrome oxidase assembly protein

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MYLLQLGLIGLCIALLPLSYVWVKADDDKFRKLVWITTFLTLDLVMFGGFTRLTDSGLGCPDWPGCYGTSSPFIAHAAIT
AAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTVIAWAARLRRKPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQ
PVIVTIHLLLGLTLLGTLGWLAARQTPLPAHEPGAGRYRAAALAALMLLVVQIALGGWVSTNYAVLACTDFPTCNGAWIP
PMDFRNGFHLWRALGMTNDGDAITQDALVAIHWTHRTFAFVVVAYLAAFALKMRRFASLRRPANGVLAVVVLQFVTGLTN
IVLQWPLPVAVAHNGGAAILLLLVVMLNFRILSSRPGRVAQPARDAAPA

Sequences:

>Translated_369_residues
MYLLQLGLIGLCIALLPLSYVWVKADDDKFRKLVWITTFLTLDLVMFGGFTRLTDSGLGCPDWPGCYGTSSPFIAHAAIT
AAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTVIAWAARLRRKPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQ
PVIVTIHLLLGLTLLGTLGWLAARQTPLPAHEPGAGRYRAAALAALMLLVVQIALGGWVSTNYAVLACTDFPTCNGAWIP
PMDFRNGFHLWRALGMTNDGDAITQDALVAIHWTHRTFAFVVVAYLAAFALKMRRFASLRRPANGVLAVVVLQFVTGLTN
IVLQWPLPVAVAHNGGAAILLLLVVMLNFRILSSRPGRVAQPARDAAPA
>Mature_369_residues
MYLLQLGLIGLCIALLPLSYVWVKADDDKFRKLVWITTFLTLDLVMFGGFTRLTDSGLGCPDWPGCYGTSSPFIAHAAIT
AAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTVIAWAARLRRKPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQ
PVIVTIHLLLGLTLLGTLGWLAARQTPLPAHEPGAGRYRAAALAALMLLVVQIALGGWVSTNYAVLACTDFPTCNGAWIP
PMDFRNGFHLWRALGMTNDGDAITQDALVAIHWTHRTFAFVVVAYLAAFALKMRRFASLRRPANGVLAVVVLQFVTGLTN
IVLQWPLPVAVAHNGGAAILLLLVVMLNFRILSSRPGRVAQPARDAAPA

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 40185; Mature: 40185

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLLQLGLIGLCIALLPLSYVWVKADDDKFRKLVWITTFLTLDLVMFGGFTRLTDSGLGC
CHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PDWPGCYGTSSPFIAHAAITAAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTVIA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAARLRRKPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQPVIVTIHLLLGLTLLGTLGW
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH
LAARQTPLPAHEPGAGRYRAAALAALMLLVVQIALGGWVSTNYAVLACTDFPTCNGAWIP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCCCC
PMDFRNGFHLWRALGMTNDGDAITQDALVAIHWTHRTFAFVVVAYLAAFALKMRRFASLR
CCCCCCHHHHHHHHCCCCCCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPANGVLAVVVLQFVTGLTNIVLQWPLPVAVAHNGGAAILLLLVVMLNFRILSSRPGRVA
CCCCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
QPARDAAPA
CCCCCCCCC
>Mature Secondary Structure
MYLLQLGLIGLCIALLPLSYVWVKADDDKFRKLVWITTFLTLDLVMFGGFTRLTDSGLGC
CHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PDWPGCYGTSSPFIAHAAITAAHQAMPTGPVSMTKAWIEMIHRYFAMAIGVLIIAQTVIA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAARLRRKPLHVSPWWPTSLLLLILVQGAFGAWTVTMKLQPVIVTIHLLLGLTLLGTLGW
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH
LAARQTPLPAHEPGAGRYRAAALAALMLLVVQIALGGWVSTNYAVLACTDFPTCNGAWIP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCCCC
PMDFRNGFHLWRALGMTNDGDAITQDALVAIHWTHRTFAFVVVAYLAAFALKMRRFASLR
CCCCCCHHHHHHHHCCCCCCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPANGVLAVVVLQFVTGLTNIVLQWPLPVAVAHNGGAAILLLLVVMLNFRILSSRPGRVA
CCCCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
QPARDAAPA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA