The gene/protein map for NC_009076 is currently unavailable.
Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is dan [H]

Identifier: 126454470

GI number: 126454470

Start: 648076

End: 649557

Strand: Direct

Name: dan [H]

Synonym: BURPS1106A_0674

Alternate gene names: 126454470

Gene position: 648076-649557 (Clockwise)

Preceding gene: 126454355

Following gene: 126453160

Centisome position: 16.25

GC content: 72.0

Gene sequence:

>1482_bases
ATGCACTCGCATCCCGAAGTGGCCGATACGCTGATCGTCGGCGCGCAGTTGTACGACGGCACGGGCGCGCCGAGCGTCGA
GCGCGACGTCGCGATACGCGGCGACCGCATCGTCGCGATCGGCAATCTGACGAACTGGCTTGCGGAGCAGGTGGTCGAGG
CGAACGGCCGCGCGCTCGCGCCCGGCTTCGTCGACGTGCACACGCACGACGACACGCACGTGATCGACGCGCCGCAGATG
CTGCCGAAGATCTCGCAGGGCGTGACGACGGTGATCGTCGGCAACTGCGGGATCAGCGCGTCGCCCGTCGCGCTCAAGGG
CGATCCGCCCGATCCGATGAACCTGCTCGGCGCGCGCGCGGCGTTTCGCTATCCGACGTTCGCCGCCTATGTCGACGCGC
TCGGCGCGGCGAAGCCGGCCGTCAACGTCGCGGCGCTCGTCGGCCACACCGCGCTGCGCAGCAACCAGATGGACCGGCTC
GACCGCGCGGCGACCGGCGCCGAAATCGCGGCGATGCGCGCGCAGCTCGAGGAGGCGCTCGCGCACGGCGCGCTCGGTCT
TTCCAGCGGCCTCGCGTACGGCTCCGCGTTCGCCGCGCCGACCGAGGAGGTGATGGCGCTCGCCGAGCCGCTCGCGAACG
CGGGCGCCGTCTACACGACGCACATGCGCACCGAGTTCGATGCGATCCTCGAGGCGATGGACGAGGCCTACCGCGTCGGC
CGGCATGCACGCGTGCCCGTCGTGATCTCGCATCTGAAGTGCGCGGGGCCGTCGAACTGGGGGCGCAGCGCCGAAGTGCT
CGCGTCGCTCGAGCGCGCGCGGCGCATCCAGCCCGTCGGCTGCGACTGCTATCCGTACAGCCGCAGCTCGTCGACGCTCG
ACATCAAGCAGGCGACGGGCGACATCGACATCACGATCACGTGGTCCGATCCGCATCCGGAAATGGCGGGCAAGCTGCTG
AGGACGATCGCCGCCGAGTGGCGCGTGTCCGAGCAGGACGCGGCGCGCCGGCTGCAGCCGGCGGGCGCCGTGTATCACAA
CATGTCGGAGGACGACGTGCGCCGGATCCTGTCGCACCCGGCGACGATGGTGGGCTCCGACGGCCTGCCGAACGATCCGC
TGCCGCATCCGCGCCTCTGGGGCGCGTTTCCGCGCGTGCTCGGCTACTACGCGCGCGACGAGCGGCTGATTTCGCTCGAG
GACGCGGTGCGCAAGATGACTGCGCTGTCCGCCCGGCGCTTCGGGCTCGCGCGGCGCGGCGAGGTGCGGGTCGGCTATCA
CGCGGATCTCGTGCTGTTCGATGCGGCGCGCGTGCGCGACGCGGCGACGTTCGAGCAGCCGCAGCAGCCCGCGCACGGGA
TCGAGGCGGTATGGGTGAACGGCGCGCTGTCTTACCGCGACGGTGCGCCCACGGGCGTGCGCGCGGGCCGCTTCGTCGCG
CGCGGCGAACGCGCGCCGGCGACGCCGGGCGACGCGTTCTGA

Upstream 100 bases:

>100_bases
CTGCGCCTGGGCGACGATTGCCGCGAGCTGCTGCGCCGGATGAAGCACGCGCTCGACATGCACCGCGGCGGCGGCGAGCG
CCAACCGTTAGGAGACTGAC

Downstream 100 bases:

>100_bases
GCACGCCCGCTTGAAGGATTCGGCGCGCGCGATCGAACGGATGCGCGGGCCGGCGATCGAACGTCGCGCGCCGTCGCGCA
TCGCGGGCGGCGCGTGTTGT

Product: N-acyl-D-aspartate deacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MHSHPEVADTLIVGAQLYDGTGAPSVERDVAIRGDRIVAIGNLTNWLAEQVVEANGRALAPGFVDVHTHDDTHVIDAPQM
LPKISQGVTTVIVGNCGISASPVALKGDPPDPMNLLGARAAFRYPTFAAYVDALGAAKPAVNVAALVGHTALRSNQMDRL
DRAATGAEIAAMRAQLEEALAHGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGAVYTTHMRTEFDAILEAMDEAYRVG
RHARVPVVISHLKCAGPSNWGRSAEVLASLERARRIQPVGCDCYPYSRSSSTLDIKQATGDIDITITWSDPHPEMAGKLL
RTIAAEWRVSEQDAARRLQPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGYYARDERLISLE
DAVRKMTALSARRFGLARRGEVRVGYHADLVLFDAARVRDAATFEQPQQPAHGIEAVWVNGALSYRDGAPTGVRAGRFVA
RGERAPATPGDAF

Sequences:

>Translated_493_residues
MHSHPEVADTLIVGAQLYDGTGAPSVERDVAIRGDRIVAIGNLTNWLAEQVVEANGRALAPGFVDVHTHDDTHVIDAPQM
LPKISQGVTTVIVGNCGISASPVALKGDPPDPMNLLGARAAFRYPTFAAYVDALGAAKPAVNVAALVGHTALRSNQMDRL
DRAATGAEIAAMRAQLEEALAHGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGAVYTTHMRTEFDAILEAMDEAYRVG
RHARVPVVISHLKCAGPSNWGRSAEVLASLERARRIQPVGCDCYPYSRSSSTLDIKQATGDIDITITWSDPHPEMAGKLL
RTIAAEWRVSEQDAARRLQPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGYYARDERLISLE
DAVRKMTALSARRFGLARRGEVRVGYHADLVLFDAARVRDAATFEQPQQPAHGIEAVWVNGALSYRDGAPTGVRAGRFVA
RGERAPATPGDAF
>Mature_493_residues
MHSHPEVADTLIVGAQLYDGTGAPSVERDVAIRGDRIVAIGNLTNWLAEQVVEANGRALAPGFVDVHTHDDTHVIDAPQM
LPKISQGVTTVIVGNCGISASPVALKGDPPDPMNLLGARAAFRYPTFAAYVDALGAAKPAVNVAALVGHTALRSNQMDRL
DRAATGAEIAAMRAQLEEALAHGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGAVYTTHMRTEFDAILEAMDEAYRVG
RHARVPVVISHLKCAGPSNWGRSAEVLASLERARRIQPVGCDCYPYSRSSSTLDIKQATGDIDITITWSDPHPEMAGKLL
RTIAAEWRVSEQDAARRLQPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGYYARDERLISLE
DAVRKMTALSARRFGLARRGEVRVGYHADLVLFDAARVRDAATFEQPQQPAHGIEAVWVNGALSYRDGAPTGVRAGRFVA
RGERAPATPGDAF

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 52783; Mature: 52783

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHPEVADTLIVGAQLYDGTGAPSVERDVAIRGDRIVAIGNLTNWLAEQVVEANGRALA
CCCCCCHHHHHEEECEEECCCCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHCCCCEEC
PGFVDVHTHDDTHVIDAPQMLPKISQGVTTVIVGNCGISASPVALKGDPPDPMNLLGARA
CCEEEEECCCCCEEECCHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHHHHH
AFRYPTFAAYVDALGAAKPAVNVAALVGHTALRSNQMDRLDRAATGAEIAAMRAQLEEAL
HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH
AHGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGAVYTTHMRTEFDAILEAMDEAYRVG
HHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCC
RHARVPVVISHLKCAGPSNWGRSAEVLASLERARRIQPVGCDCYPYSRSSSTLDIKQATG
CCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
DIDITITWSDPHPEMAGKLLRTIAAEWRVSEQDAARRLQPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGYYARDERLISLEDAVRKMTALSARRFGLARRG
HHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCC
EVRVGYHADLVLFDAARVRDAATFEQPQQPAHGIEAVWVNGALSYRDGAPTGVRAGRFVA
CEEECEECCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCEE
RGERAPATPGDAF
CCCCCCCCCCCCC
>Mature Secondary Structure
MHSHPEVADTLIVGAQLYDGTGAPSVERDVAIRGDRIVAIGNLTNWLAEQVVEANGRALA
CCCCCCHHHHHEEECEEECCCCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHCCCCEEC
PGFVDVHTHDDTHVIDAPQMLPKISQGVTTVIVGNCGISASPVALKGDPPDPMNLLGARA
CCEEEEECCCCCEEECCHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHHHHH
AFRYPTFAAYVDALGAAKPAVNVAALVGHTALRSNQMDRLDRAATGAEIAAMRAQLEEAL
HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH
AHGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGAVYTTHMRTEFDAILEAMDEAYRVG
HHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCC
RHARVPVVISHLKCAGPSNWGRSAEVLASLERARRIQPVGCDCYPYSRSSSTLDIKQATG
CCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
DIDITITWSDPHPEMAGKLLRTIAAEWRVSEQDAARRLQPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGYYARDERLISLEDAVRKMTALSARRFGLARRG
HHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCC
EVRVGYHADLVLFDAARVRDAATFEQPQQPAHGIEAVWVNGALSYRDGAPTGVRAGRFVA
CEEECEECCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCEE
RGERAPATPGDAF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]