| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454457
Identifier: 126454457
GI number: 126454457
Start: 3057090
End: 3058328
Strand: Reverse
Name: 126454457
Synonym: BURPS1106A_3135
Alternate gene names: NA
Gene position: 3058328-3057090 (Counterclockwise)
Preceding gene: 126455338
Following gene: 126453040
Centisome position: 76.68
GC content: 56.5
Gene sequence:
>1239_bases ATGAAATCTGAAATACCTGTCACCGTTCCGGATCGATTCGATGCCGCCGACGTGCTGGGGGCGCCACAGCCCGCCCGCGT CGCGGATCCGTCGACACTTGCGAATCCCGCCGACCGGCTTTCGACCCACGACAACGGCTTCGGGCTGCTTCGCCTGCTGT TCGCGACGATGGTGCTTTGGGACCATGCGTTTCCTCTTGGCGGCTTCGGTGCCGACCCGATGTGGCGCCTGACGCTCAAT CAGGATTCGATGGGGGGAATCTGCGTCTCCGGCTTCTTCGCGATCAGTGGATTTCTCATTGCGAAGAGCGGCATGCGAGC GGATGCGTTGCAGTTTGCGTGGCGCCGATGCGTGCGGATCTTTCCGGCGTACTGGGCGGTGCTGATCGTCACCGCGCTCT GTGTCGGGCCGATCATTCACTACGTGCAGGCGGGAACGCTGCATGGATATTGGAATGCAGCGCTTGGCGGTCCGCTGGGC TATATCACGAACAACTGGCGGCTCACGATCGGACAATATGGAATCAACGATCTGCTGCGAGACACGACACCCTATGGGCA TTCGATTTCGGAGAGCGTGTTCAACGGCTCGATTTGGACATTGATATACGAGGCGAAATGCTATGTGATGGTCGGTCTTT TTGCGATGTTCGGACTTCTTACGGCGCACCGCAGGGTGTTGCTTGCCGTGACGGTTGTCGCATGGTTCGTACTCGCGATC CAGACTATCAATCCGGCATTCTCCGCTCAACTCCTCCCGTGGGCGGGAGATCGCCATCTCGTTCAATACGGAACGATTTT CCTGATTGGATCGAGTGCCGCAGCGTATTCGAAGAGTCTGCCGATTTCAGACAAACTGGGAGCGTTTGCTGTCGTCGTTT ATCTGATTTCGTTGTTTAAGGGTGGATATCTGCTGCTTGGCTATCCGGCGATGGTATACGCGATCCTCTGGCTTGCTTGC CGTCTACCGCGCTGGGCGCGCCGGATCGGTTCCAGGAACGACTACTCGTATGGAATCTACGTGTTCGGTTTCCTGGTTCA GCAGGTTTTGGCGTACGTGGGGGCATACAAGTACGGTTTTGTTTTTTATCTTGCCGCCTCGGTGTTCTTTACCTTCATCT GCGCATGGTTCAGTTGGCATCTGATCGAGAAACGCGCCCTGGCGCTGAAGGATTGGGGGCCCGGACAAGGATGGAAGTAC TGTTTGGCTAGATTGACTATGAAGAAAGAGGGAGTGTGA
Upstream 100 bases:
>100_bases TGAAGTCGCATTCGACGAGTGTCAGTACAGGATTAATAGGTATTCCAATGCATGAGATCGTGCTTGAGCGGGATACGCTG AACGAAGTTGGGGCGGCGCA
Downstream 100 bases:
>100_bases TGAGCGACGTGAATGCAAGCTTGGTTGACGGGAAAAAGATCCTCGTGACCGGTGGGGCTGGCTTTATCGGCTGCGCGATA TCGGAGCGACTCGCAGCGCG
Product: putative O-antigen acetylase WbiA
Products: NA
Alternate protein names: Acyltransferase Family Protein; Acyltransferase; O-Antigen Acetylase; Acetyltransferase Protein; Sugar Acetylase; O-Acetyl Transferase; O-Acetyl-Transferase; O-Acyl Transferase; Acyltransferase Putative; Acetyltransferase AtfA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MKSEIPVTVPDRFDAADVLGAPQPARVADPSTLANPADRLSTHDNGFGLLRLLFATMVLWDHAFPLGGFGADPMWRLTLN QDSMGGICVSGFFAISGFLIAKSGMRADALQFAWRRCVRIFPAYWAVLIVTALCVGPIIHYVQAGTLHGYWNAALGGPLG YITNNWRLTIGQYGINDLLRDTTPYGHSISESVFNGSIWTLIYEAKCYVMVGLFAMFGLLTAHRRVLLAVTVVAWFVLAI QTINPAFSAQLLPWAGDRHLVQYGTIFLIGSSAAAYSKSLPISDKLGAFAVVVYLISLFKGGYLLLGYPAMVYAILWLAC RLPRWARRIGSRNDYSYGIYVFGFLVQQVLAYVGAYKYGFVFYLAASVFFTFICAWFSWHLIEKRALALKDWGPGQGWKY CLARLTMKKEGV
Sequences:
>Translated_412_residues MKSEIPVTVPDRFDAADVLGAPQPARVADPSTLANPADRLSTHDNGFGLLRLLFATMVLWDHAFPLGGFGADPMWRLTLN QDSMGGICVSGFFAISGFLIAKSGMRADALQFAWRRCVRIFPAYWAVLIVTALCVGPIIHYVQAGTLHGYWNAALGGPLG YITNNWRLTIGQYGINDLLRDTTPYGHSISESVFNGSIWTLIYEAKCYVMVGLFAMFGLLTAHRRVLLAVTVVAWFVLAI QTINPAFSAQLLPWAGDRHLVQYGTIFLIGSSAAAYSKSLPISDKLGAFAVVVYLISLFKGGYLLLGYPAMVYAILWLAC RLPRWARRIGSRNDYSYGIYVFGFLVQQVLAYVGAYKYGFVFYLAASVFFTFICAWFSWHLIEKRALALKDWGPGQGWKY CLARLTMKKEGV >Mature_412_residues MKSEIPVTVPDRFDAADVLGAPQPARVADPSTLANPADRLSTHDNGFGLLRLLFATMVLWDHAFPLGGFGADPMWRLTLN QDSMGGICVSGFFAISGFLIAKSGMRADALQFAWRRCVRIFPAYWAVLIVTALCVGPIIHYVQAGTLHGYWNAALGGPLG YITNNWRLTIGQYGINDLLRDTTPYGHSISESVFNGSIWTLIYEAKCYVMVGLFAMFGLLTAHRRVLLAVTVVAWFVLAI QTINPAFSAQLLPWAGDRHLVQYGTIFLIGSSAAAYSKSLPISDKLGAFAVVVYLISLFKGGYLLLGYPAMVYAILWLAC RLPRWARRIGSRNDYSYGIYVFGFLVQQVLAYVGAYKYGFVFYLAASVFFTFICAWFSWHLIEKRALALKDWGPGQGWKY CLARLTMKKEGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45693; Mature: 45693
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEIPVTVPDRFDAADVLGAPQPARVADPSTLANPADRLSTHDNGFGLLRLLFATMVLW CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHH DHAFPLGGFGADPMWRLTLNQDSMGGICVSGFFAISGFLIAKSGMRADALQFAWRRCVRI HCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FPAYWAVLIVTALCVGPIIHYVQAGTLHGYWNAALGGPLGYITNNWRLTIGQYGINDLLR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEECCEEEEEECCCHHHHHH DTTPYGHSISESVFNGSIWTLIYEAKCYVMVGLFAMFGLLTAHRRVLLAVTVVAWFVLAI CCCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTINPAFSAQLLPWAGDRHLVQYGTIFLIGSSAAAYSKSLPISDKLGAFAVVVYLISLFK HHCCHHHCCEECCCCCCCCEEEECEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHC GGYLLLGYPAMVYAILWLACRLPRWARRIGSRNDYSYGIYVFGFLVQQVLAYVGAYKYGF CCEEEECCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VFYLAASVFFTFICAWFSWHLIEKRALALKDWGPGQGWKYCLARLTMKKEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSEIPVTVPDRFDAADVLGAPQPARVADPSTLANPADRLSTHDNGFGLLRLLFATMVLW CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHH DHAFPLGGFGADPMWRLTLNQDSMGGICVSGFFAISGFLIAKSGMRADALQFAWRRCVRI HCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FPAYWAVLIVTALCVGPIIHYVQAGTLHGYWNAALGGPLGYITNNWRLTIGQYGINDLLR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEECCEEEEEECCCHHHHHH DTTPYGHSISESVFNGSIWTLIYEAKCYVMVGLFAMFGLLTAHRRVLLAVTVVAWFVLAI CCCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTINPAFSAQLLPWAGDRHLVQYGTIFLIGSSAAAYSKSLPISDKLGAFAVVVYLISLFK HHCCHHHCCEECCCCCCCCEEEECEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHC GGYLLLGYPAMVYAILWLACRLPRWARRIGSRNDYSYGIYVFGFLVQQVLAYVGAYKYGF CCEEEECCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VFYLAASVFFTFICAWFSWHLIEKRALALKDWGPGQGWKYCLARLTMKKEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA