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The map label for this gene is ynfA [C]

Identifier: 126454434

GI number: 126454434

Start: 1450457

End: 1450876

Strand: Direct

Name: ynfA [C]

Synonym: BURPS1106A_1494

Alternate gene names: 126454434

Gene position: 1450457-1450876 (Clockwise)

Preceding gene: 126453340

Following gene: 126452658

Centisome position: 36.37

GC content: 71.43

Gene sequence:

>420_bases
TTGGCGGGCGTCGCGTGGGGTAAGATCGCGCCGTTTGCCGCGGGCGTCGCGCGGCGTTTTCCACGCGCATCTCGCGCACG
TCCCGCCATGCTCTCACTCGCGAAAATCGCCGCGTTGTTCGTCTTGACCGCCGTCGCCGAGATCGTCGGCTGCTATTTGC
CCTGGCTCGTGCTGAAAGCGGGCAAGCCGGCGTGGCTGCTCGCGCCCGCGGCGCTGTCGCTCGCGCTGTTCGCATGGCTG
CTGACGCTGCATCCGGCCGCGGCCGCGCGCACGTATGCGGCGTACGGCGGCGTCTACATCGCCGTTGCGCTCGCGTGGCT
GAGGATCGTCGACGGCGTGCCGCTGTCGCGCTGGGATGTGGCGGGCGCGGCGCTCGCGCTCGCCGGTATGTCGGTGATCG
CGCTCCAGCCGCGCGGGTGA

Upstream 100 bases:

>100_bases
GGTCTGGTGACCGAAATAAATGACAGGCGTAGACTGTTGAAAGAAGCGACATAATAGCACGATGACGGAGGATCGTGCAA
ATTGCCGGTCATGCGGCGGT

Downstream 100 bases:

>100_bases
AGTCGGCGCGGCGCGGGCAGTGGGCGTCGCGCGGCGCCGACCGTGGGCGGCGGCGAGGCGGGGGAACACGCGCCGCGACC
GTGCTTGGCGGTGAGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAGVAWGKIAPFAAGVARRFPRASRARPAMLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPAWLLAPAALSLALFAWL
LTLHPAAAARTYAAYGGVYIAVALAWLRIVDGVPLSRWDVAGAALALAGMSVIALQPRG

Sequences:

>Translated_139_residues
MAGVAWGKIAPFAAGVARRFPRASRARPAMLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPAWLLAPAALSLALFAWL
LTLHPAAAARTYAAYGGVYIAVALAWLRIVDGVPLSRWDVAGAALALAGMSVIALQPRG
>Mature_138_residues
AGVAWGKIAPFAAGVARRFPRASRARPAMLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPAWLLAPAALSLALFAWLL
TLHPAAAARTYAAYGGVYIAVALAWLRIVDGVPLSRWDVAGAALALAGMSVIALQPRG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=60.3960396039604, Blast_Score=122, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 14461; Mature: 14329

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVAWGKIAPFAAGVARRFPRASRARPAMLSLAKIAALFVLTAVAEIVGCYLPWLVLKA
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKPAWLLAPAALSLALFAWLLTLHPAAAARTYAAYGGVYIAVALAWLRIVDGVPLSRWDV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AGAALALAGMSVIALQPRG
HHHHHHHHCCHHEEECCCC
>Mature Secondary Structure 
AGVAWGKIAPFAAGVARRFPRASRARPAMLSLAKIAALFVLTAVAEIVGCYLPWLVLKA
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKPAWLLAPAALSLALFAWLLTLHPAAAARTYAAYGGVYIAVALAWLRIVDGVPLSRWDV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AGAALALAGMSVIALQPRG
HHHHHHHHCCHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA