| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is gloB [H]
Identifier: 126452658
GI number: 126452658
Start: 1453306
End: 1454112
Strand: Direct
Name: gloB [H]
Synonym: BURPS1106A_1498
Alternate gene names: 126452658
Gene position: 1453306-1454112 (Clockwise)
Preceding gene: 126454434
Following gene: 126451560
Centisome position: 36.44
GC content: 72.86
Gene sequence:
>807_bases ATGAACGAGCTGGAATACGTGCCGGTGCCGGCATTCGACGACAACTACATCTGGCTCGTGTCGGACGGCCGCCAGGCGGT CGCCGTCGATCCGGGCGAAGCCGCGCCGGTGCGCCGCCATCTCGACGCGCGAGGCTGGCGGCTGACCGCTATTTTACTCA CGCACCACCACCGCGACCACGTCGGCGGAGTGGCCGAGCTGCTCGCGGGCGCGCGCGAAGGCGAGCCGATCGCGGTGTTC GGCCCCGCGCACGAGGCGATCGAGCACATCACGCGCCGCGTGGCGGGCGGCGAGCGCGTGCGCATCGGCGCGCCCGCGCT CGAGTTCGACGTGATCGACGTGCCGGGCCACACGCGCGGCCACATCGCATACTTCCAGCCGGCGGGGCCGGGCAACGCCG CGCCGCATCTCTTTTGCGGCGACACGCTGTTCTCGTGCGGCTGCGGCCGCCTCTTCGAGGGCACGCCCGCGCAGATGCTC GCGTCGCTCGACGCGCTCGCGGCGCTGCCGGGCGACACGCGCGTGCACTGCGCGCACGAGTACACGCTGTCGAACATCCA GTTCGCGCTCGCATGCGAGCCGGGGAACGCGGCGCTCGCCGCGTGGCGCGACGAAGCGCGCGCGCGCCGCGCCCGCGGCG AGCCGACGTTGCCCACGACGATCGCGCACGAGTGCGCGGTGAACCCGTTCCTGCGCGCGGACAGCGCCTCGATCCGCGCG ACGCTCGAGGCGCGGCTGCACGAGGCGGCGCCCGACCGGCTCGCGGCGTTCACGTTGATGCGCGAGTGGAAAAACCGTTT TCGTTGA
Upstream 100 bases:
>100_bases GCCTGCTCCCAGCCAAGCACATAGCGCCCGGGCGGGGAGTCGGTCCAGGCGGGCCAGTCTATAATCGAACGGTCAGACAT ATCTCGGTGATTGCGCGCCC
Downstream 100 bases:
>100_bases GCCCGTGCAATAGTCGGCCAAGCTCAACCGGAATCTCGAGAATCGGCCCCAAATACCCGATTTAGCAGGTTTTTTCGGCC TTTTTGTTGACGCGAAGCAC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNELEYVPVPAFDDNYIWLVSDGRQAVAVDPGEAAPVRRHLDARGWRLTAILLTHHHRDHVGGVAELLAGAREGEPIAVF GPAHEAIEHITRRVAGGERVRIGAPALEFDVIDVPGHTRGHIAYFQPAGPGNAAPHLFCGDTLFSCGCGRLFEGTPAQML ASLDALAALPGDTRVHCAHEYTLSNIQFALACEPGNAALAAWRDEARARRARGEPTLPTTIAHECAVNPFLRADSASIRA TLEARLHEAAPDRLAAFTLMREWKNRFR
Sequences:
>Translated_268_residues MNELEYVPVPAFDDNYIWLVSDGRQAVAVDPGEAAPVRRHLDARGWRLTAILLTHHHRDHVGGVAELLAGAREGEPIAVF GPAHEAIEHITRRVAGGERVRIGAPALEFDVIDVPGHTRGHIAYFQPAGPGNAAPHLFCGDTLFSCGCGRLFEGTPAQML ASLDALAALPGDTRVHCAHEYTLSNIQFALACEPGNAALAAWRDEARARRARGEPTLPTTIAHECAVNPFLRADSASIRA TLEARLHEAAPDRLAAFTLMREWKNRFR >Mature_268_residues MNELEYVPVPAFDDNYIWLVSDGRQAVAVDPGEAAPVRRHLDARGWRLTAILLTHHHRDHVGGVAELLAGAREGEPIAVF GPAHEAIEHITRRVAGGERVRIGAPALEFDVIDVPGHTRGHIAYFQPAGPGNAAPHLFCGDTLFSCGCGRLFEGTPAQML ASLDALAALPGDTRVHCAHEYTLSNIQFALACEPGNAALAAWRDEARARRARGEPTLPTTIAHECAVNPFLRADSASIRA TLEARLHEAAPDRLAAFTLMREWKNRFR
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=263, Percent_Identity=37.2623574144487, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI94538322, Length=263, Percent_Identity=36.5019011406844, Blast_Score=168, Evalue=5e-42, Organism=Homo sapiens, GI14150041, Length=233, Percent_Identity=41.6309012875536, Blast_Score=154, Evalue=7e-38, Organism=Homo sapiens, GI116642887, Length=244, Percent_Identity=35.2459016393443, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI21703352, Length=244, Percent_Identity=35.2459016393443, Blast_Score=144, Evalue=6e-35, Organism=Homo sapiens, GI46361987, Length=203, Percent_Identity=42.8571428571429, Blast_Score=134, Evalue=8e-32, Organism=Escherichia coli, GI1786406, Length=262, Percent_Identity=45.8015267175573, Blast_Score=198, Evalue=2e-52, Organism=Escherichia coli, GI1787158, Length=193, Percent_Identity=34.1968911917098, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17536925, Length=260, Percent_Identity=34.6153846153846, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6320478, Length=269, Percent_Identity=31.2267657992565, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=239, Percent_Identity=30.1255230125523, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356335, Length=268, Percent_Identity=36.5671641791045, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24667711, Length=268, Percent_Identity=36.5671641791045, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24667703, Length=268, Percent_Identity=36.5671641791045, Blast_Score=165, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 29131; Mature: 29131
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELEYVPVPAFDDNYIWLVSDGRQAVAVDPGEAAPVRRHLDARGWRLTAILLTHHHRDH CCCCCEEECCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHCCCCEEEEEEEEECCCCHH VGGVAELLAGAREGEPIAVFGPAHEAIEHITRRVAGGERVRIGAPALEFDVIDVPGHTRG HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCC HIAYFQPAGPGNAAPHLFCGDTLFSCGCGRLFEGTPAQMLASLDALAALPGDTRVHCAHE CEEEECCCCCCCCCCEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE YTLSNIQFALACEPGNAALAAWRDEARARRARGEPTLPTTIAHECAVNPFLRADSASIRA EEECCEEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCHHHH TLEARLHEAAPDRLAAFTLMREWKNRFR HHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNELEYVPVPAFDDNYIWLVSDGRQAVAVDPGEAAPVRRHLDARGWRLTAILLTHHHRDH CCCCCEEECCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHCCCCEEEEEEEEECCCCHH VGGVAELLAGAREGEPIAVFGPAHEAIEHITRRVAGGERVRIGAPALEFDVIDVPGHTRG HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCC HIAYFQPAGPGNAAPHLFCGDTLFSCGCGRLFEGTPAQMLASLDALAALPGDTRVHCAHE CEEEECCCCCCCCCCEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEE YTLSNIQFALACEPGNAALAAWRDEARARRARGEPTLPTTIAHECAVNPFLRADSASIRA EEECCEEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCHHHH TLEARLHEAAPDRLAAFTLMREWKNRFR HHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA