| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454398
Identifier: 126454398
GI number: 126454398
Start: 3605219
End: 3606025
Strand: Direct
Name: 126454398
Synonym: BURPS1106A_3689
Alternate gene names: NA
Gene position: 3605219-3606025 (Clockwise)
Preceding gene: 126452753
Following gene: 126451514
Centisome position: 90.39
GC content: 58.98
Gene sequence:
>807_bases ATGGACTCGAACGATCTCGTCCCCAGTATCAGCATCGCGAATCTCGGCAATCAGCGTGTCGCAGTCGTGCAGCGCGTACG TGCCGCGCTGGATCTGCTCGGCGAAGCCCAACAGCTTGCGAAGTCAGCCAATCTAGGGTTCCCGCGGCTTGTGCTCGACG AAAGCTATGGCTGTCGCGGCAGACCAATCATTACCGGAGAGTACGCAAAACGCGACGAGGCCGAAGCCGCGATGGTGCGG ATCATCGACATTCGCGGTTGGGACTACCTGCTATCGCAGTCGGGCTTGCGAACATTCATGGACTCGAAAGCCCGCGAGCA ATGGAGTAACCAGATTGCGGAAGGCGACGTCCCTGAACTCACCCCGGCCAACATCGAGGCCACGTTCACGCAGCTTTACG GTGCGCGCGGCGACATGTTCGAACGCGGCGTACTCGAATGCTTCAGGCAGCTATCGTGGAACTACAAGAGCAACGAGCCT TTCCGGTTCAGCAGAAGGATCATCCTGAAGTACCTGTTCAGCGGTGGCTTTCTCAACTATCGAGCAACCGACAAGCTGGA CGATCTGATTCGCGTCTTCTTCGTGTTGGATGGCAAGCCCGAGCCCGATCATCGACACGGCGCGCATGTGCTCGTCGCGG GCGACCGCCAGAGCCGACGTACGGAAGCCGAAAATGACTACTTCCACCTACGCTGGTTTAAAAACGGCAACGCTCACCTG ACGTTCAAGCGGCCGGACTTGGTCGAACAGATGAACCGCATCCTCGCCAAACACTACCCGAACGCGCTCGCCGCCGAAGC CCGGTAG
Upstream 100 bases:
>100_bases CCGCTCGCAACGCCCGTTTACACCGTATCCAATTTCAACAGCCTGCTAGTGCCCGGCCTTAGCTGCCTCGTTTTCCATCC CTTTCTCATCGTCACGAAAC
Downstream 100 bases:
>100_bases TCCACGACTTCCTGCGCAGTCCTCGGACGCGCATCGCGTCTCAGCCATTTCCCCTTCTCTTTCACCCTGCAAGCATCCGG GACGACCGGAGGCACGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRGRPIITGEYAKRDEAEAAMVR IIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPELTPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEP FRFSRRIILKYLFSGGFLNYRATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL TFKRPDLVEQMNRILAKHYPNALAAEAR
Sequences:
>Translated_268_residues MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRGRPIITGEYAKRDEAEAAMVR IIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPELTPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEP FRFSRRIILKYLFSGGFLNYRATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL TFKRPDLVEQMNRILAKHYPNALAAEAR >Mature_268_residues MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRGRPIITGEYAKRDEAEAAMVR IIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPELTPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEP FRFSRRIILKYLFSGGFLNYRATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL TFKRPDLVEQMNRILAKHYPNALAAEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30651; Mature: 30651
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRG CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC RPIITGEYAKRDEAEAAMVRIIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPEL CCEEECCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEPFRFSRRIILKYLFSGGFLNY CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEC RATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHCCCCCCCEEEEEEEECCCEEE TFKRPDLVEQMNRILAKHYPNALAAEAR EECCCHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRG CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC RPIITGEYAKRDEAEAAMVRIIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPEL CCEEECCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEPFRFSRRIILKYLFSGGFLNY CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEC RATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHCCCCCCCEEEEEEEECCCEEE TFKRPDLVEQMNRILAKHYPNALAAEAR EECCCHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA