| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452753
Identifier: 126452753
GI number: 126452753
Start: 3601781
End: 3602713
Strand: Direct
Name: 126452753
Synonym: BURPS1106A_3686
Alternate gene names: NA
Gene position: 3601781-3602713 (Clockwise)
Preceding gene: 126451910
Following gene: 126454398
Centisome position: 90.31
GC content: 62.7
Gene sequence:
>933_bases ATGCTCAAGGGACTTTCCCTCACTCCGCCCGTTGTGGGCCGCATCTCCATTGGCCGTGTGACAGAGAAGAACGGCAAGCG CGTGCCCGCCGCGGACGACCAGTTCACGCTGACGACCCAAGTGCAGCAGCGTGGCGAATGGCTTATGCACCCTCTGAACG AGCGGTTACGCAAGGCCGCTCCAGGCAAGCTGCGCGCGATTCCCGTACGCATGCTTTTTAACAACCCGAACCTGAACTTG CGGGCGGACTATTCGCTGTTCGACCGCGACACGGGGCGCCCCGTGTGCGTTGGCAACGGCGAAACGTGCCGGCGAGTCTA TATGGATGGCAGCGGAATCGAGACCCTACCGTGTCCTTCGCCGGACGGTTGCGCCTTCGGCCAGCAAGGCGGCTGCAAAC CTTACGCACGGCTGAACGTACTCATTGATGACCATGAAGGAGACCAGCTTTCGTCGTTCATATTCCGCACGACATCCTGG AACTCGATCCGCACGCTAGCCGCGCGCCTACATTACTTCAACGCCGTGTCAGGCAACCTTCTCGCTTGCCTGCCGCTTCA ACTCGTGCTCAGGGGCAAGTCGACGGCGCAAAGTTACAGGGCGCCGATTTATTACGTCGATCTGGGCGTTCGTTCGGGCA GCACGCTTGAGGAGGCGCTGGTGGAAGCGAAGGAACTCGACGCACGACGCAGGGCAGCCGGCTTCAATCAGGCTGCGCTC GATGCCGCCGCCGGCGCGGGGTTTGCGAACGGAGCGTTCGAAGATAGCCCGGACGAGCAAACTGCGGTGGCGGAAGCGTT CTTTCCGCCCTCGGAGCTGCGAGATACGGATCGTGCCTCACCGGCGGTACCGGAAGCGCCGAGCTCGGCTGCGCCGACGT TGCGCGAGAAACTGGAGCGCAAGGCGGTGCTGCTCGAGGGGAAGGCAGCATGA
Upstream 100 bases:
>100_bases ATCGCAAAGAGCTGGAAGCCCACCTCGCGCGCTAGCCGTCGCAGCGGTTATTTCATCGCCGGCGGCGCGTAAACCCCACT TACCCATTTCAAGGACCAAC
Downstream 100 bases:
>100_bases ACGTACGGCACCGAGCGCTCCCCCTGGCGATCCTGGCGACGTCGACTGCGCTCAGTCTGTCGATTCTTGCGGGCTGGCAA CGAGGCGGCACCTTACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLKGLSLTPPVVGRISIGRVTEKNGKRVPAADDQFTLTTQVQQRGEWLMHPLNERLRKAAPGKLRAIPVRMLFNNPNLNL RADYSLFDRDTGRPVCVGNGETCRRVYMDGSGIETLPCPSPDGCAFGQQGGCKPYARLNVLIDDHEGDQLSSFIFRTTSW NSIRTLAARLHYFNAVSGNLLACLPLQLVLRGKSTAQSYRAPIYYVDLGVRSGSTLEEALVEAKELDARRRAAGFNQAAL DAAAGAGFANGAFEDSPDEQTAVAEAFFPPSELRDTDRASPAVPEAPSSAAPTLREKLERKAVLLEGKAA
Sequences:
>Translated_310_residues MLKGLSLTPPVVGRISIGRVTEKNGKRVPAADDQFTLTTQVQQRGEWLMHPLNERLRKAAPGKLRAIPVRMLFNNPNLNL RADYSLFDRDTGRPVCVGNGETCRRVYMDGSGIETLPCPSPDGCAFGQQGGCKPYARLNVLIDDHEGDQLSSFIFRTTSW NSIRTLAARLHYFNAVSGNLLACLPLQLVLRGKSTAQSYRAPIYYVDLGVRSGSTLEEALVEAKELDARRRAAGFNQAAL DAAAGAGFANGAFEDSPDEQTAVAEAFFPPSELRDTDRASPAVPEAPSSAAPTLREKLERKAVLLEGKAA >Mature_310_residues MLKGLSLTPPVVGRISIGRVTEKNGKRVPAADDQFTLTTQVQQRGEWLMHPLNERLRKAAPGKLRAIPVRMLFNNPNLNL RADYSLFDRDTGRPVCVGNGETCRRVYMDGSGIETLPCPSPDGCAFGQQGGCKPYARLNVLIDDHEGDQLSSFIFRTTSW NSIRTLAARLHYFNAVSGNLLACLPLQLVLRGKSTAQSYRAPIYYVDLGVRSGSTLEEALVEAKELDARRRAAGFNQAAL DAAAGAGFANGAFEDSPDEQTAVAEAFFPPSELRDTDRASPAVPEAPSSAAPTLREKLERKAVLLEGKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33630; Mature: 33630
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGLSLTPPVVGRISIGRVTEKNGKRVPAADDQFTLTTQVQQRGEWLMHPLNERLRKAA CCCCCCCCCCCCCEEEECEEECCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHCC PGKLRAIPVRMLFNNPNLNLRADYSLFDRDTGRPVCVGNGETCRRVYMDGSGIETLPCPS CCCEEEEEEEEEEECCCCEEEECCCEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCC PDGCAFGQQGGCKPYARLNVLIDDHEGDQLSSFIFRTTSWNSIRTLAARLHYFNAVSGNL CCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCE LACLPLQLVLRGKSTAQSYRAPIYYVDLGVRSGSTLEEALVEAKELDARRRAAGFNQAAL EHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH DAAAGAGFANGAFEDSPDEQTAVAEAFFPPSELRDTDRASPAVPEAPSSAAPTLREKLER HHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH KAVLLEGKAA HEEEEECCCC >Mature Secondary Structure MLKGLSLTPPVVGRISIGRVTEKNGKRVPAADDQFTLTTQVQQRGEWLMHPLNERLRKAA CCCCCCCCCCCCCEEEECEEECCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHCC PGKLRAIPVRMLFNNPNLNLRADYSLFDRDTGRPVCVGNGETCRRVYMDGSGIETLPCPS CCCEEEEEEEEEEECCCCEEEECCCEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCC PDGCAFGQQGGCKPYARLNVLIDDHEGDQLSSFIFRTTSWNSIRTLAARLHYFNAVSGNL CCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCE LACLPLQLVLRGKSTAQSYRAPIYYVDLGVRSGSTLEEALVEAKELDARRRAAGFNQAAL EHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH DAAAGAGFANGAFEDSPDEQTAVAEAFFPPSELRDTDRASPAVPEAPSSAAPTLREKLER HHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH KAVLLEGKAA HEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA