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The map label for this gene is 126454393

Identifier: 126454393

GI number: 126454393

Start: 1804361

End: 1804837

Strand: Reverse

Name: 126454393

Synonym: BURPS1106A_1847

Alternate gene names: NA

Gene position: 1804837-1804361 (Counterclockwise)

Preceding gene: 126451561

Following gene: 126453978

Centisome position: 45.25

GC content: 66.88

Gene sequence:

>477_bases
ATGAAATGGGACGACGTCGGCTCGATGCCGTGTTCGGTCGCTCGCACGCTCGCCGTGCTCGGCGACCGCTGGACGATGCT
GATCCTGCGCAACGCATTTCTCGGCCATCGCCGCTTCGAAGCGTTCCAGACGCAACTGGGACTCACCCGCCACGTGCTCG
CGGAGCGGCTCGCGCGGCTCGTCGACGAAGGCATCTTCACGAAGCGCGCGTATCAGGACCGGCCGCCGCGCTTCGAATAT
CGCCTGTCGCAGAAAGGCCTGGATCTGTATCCGGTACTGCTCGCGCTTGCCGCGTGGGGAGACCGCTGGAAGGACGACGG
CAACGGCCCGCCCGTCGTGCTGCGCCACCGCCGATGCGCTCACGTGATGCATCCGGTGATGGTGTGCTCCGAATGCGGCG
AGCCGATCGATCCCCGGGAAGTCGAACCCATGCCGGGGCCGGGCTGGACCAAGCAGCAGGCGGACAAGGTCGACTGA

Upstream 100 bases:

>100_bases
TTGGCAGACGTTCATCGGCTGTCAACACAACGAGGCGCAGCCGATTCGAGCGTGCGTTCTATAATCGAACGCACTTTCCC
TGCTTTCCCGGAATCCGATC

Downstream 100 bases:

>100_bases
CGGTGCAGGCCGCGCGCGGGCGCGCGGCGGCGGCGGCGCGCTTGCGCCAGCGGAACCGGCGCAAGCGCGGACGTCCGCGC
GCGCGAACGATGCGCGCAGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKWDDVGSMPCSVARTLAVLGDRWTMLILRNAFLGHRRFEAFQTQLGLTRHVLAERLARLVDEGIFTKRAYQDRPPRFEY
RLSQKGLDLYPVLLALAAWGDRWKDDGNGPPVVLRHRRCAHVMHPVMVCSECGEPIDPREVEPMPGPGWTKQQADKVD

Sequences:

>Translated_158_residues
MKWDDVGSMPCSVARTLAVLGDRWTMLILRNAFLGHRRFEAFQTQLGLTRHVLAERLARLVDEGIFTKRAYQDRPPRFEY
RLSQKGLDLYPVLLALAAWGDRWKDDGNGPPVVLRHRRCAHVMHPVMVCSECGEPIDPREVEPMPGPGWTKQQADKVD
>Mature_158_residues
MKWDDVGSMPCSVARTLAVLGDRWTMLILRNAFLGHRRFEAFQTQLGLTRHVLAERLARLVDEGIFTKRAYQDRPPRFEY
RLSQKGLDLYPVLLALAAWGDRWKDDGNGPPVVLRHRRCAHVMHPVMVCSECGEPIDPREVEPMPGPGWTKQQADKVD

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 18105; Mature: 18105

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWDDVGSMPCSVARTLAVLGDRWTMLILRNAFLGHRRFEAFQTQLGLTRHVLAERLARL
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEGIFTKRAYQDRPPRFEYRLSQKGLDLYPVLLALAAWGDRWKDDGNGPPVVLRHRRCA
HHHHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHH
HVMHPVMVCSECGEPIDPREVEPMPGPGWTKQQADKVD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKWDDVGSMPCSVARTLAVLGDRWTMLILRNAFLGHRRFEAFQTQLGLTRHVLAERLARL
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEGIFTKRAYQDRPPRFEYRLSQKGLDLYPVLLALAAWGDRWKDDGNGPPVVLRHRRCA
HHHHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHH
HVMHPVMVCSECGEPIDPREVEPMPGPGWTKQQADKVD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]