| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is phoA [H]
Identifier: 126454088
GI number: 126454088
Start: 367756
End: 369186
Strand: Direct
Name: phoA [H]
Synonym: BURPS1106A_0404
Alternate gene names: 126454088
Gene position: 367756-369186 (Clockwise)
Preceding gene: 126451852
Following gene: 126453494
Centisome position: 9.22
GC content: 69.25
Gene sequence:
>1431_bases GTGAGACTGGCCGCGCTCCTTGGCGCGAGCGTCTTCGCGGCGGCGGGCTGCGGCAGCGACGAGCCGAAGACGCCGGGCGC ATCGGACAACGGCGCGCAAACGGGCGCCGCGCGCAACGTCATCTTCTTTCTGGGCGACGGAATGGGGATGACGACGCTCA CGGCCGCGCGAATCTATGCGCTCGGCGAGGACGGCGCGCTCACGCTCGACACGCTGCCCGAGACCGCGTTCGTGAAGACC TATTCGAACGATGCGCAGGTGACGGACAGCGCGCCGTCGATGTCCGCATATATGACGGGCGTGAAGACGAACAACGAAGT GATCTCGATGACGCCCGACACGAAGGCGATCGAGCCGAGCGCGAGTCTCACCGGCAACTGCGGCGCGAACAACGGCAAGC CGGTGCCGACGCTGCTCGAGATCGCGAAGGCGAAGGGGCTCGCCACCGGTGTCGTGACGACGACCCGCGTCACCCACGCG ACGCCCGCCGCGACCTACGCGCACGTGTGCCACCGCGACGCCGAGAACGACATCGCCGCGCAGCTCGTGCCGGGCGGCGC GGGCTACAACGCGGCGCTCGGCGGCGGCGTGGATGTCGTGCTGGGCGGCGGCGCGCAATTCTTCGTGCCGAAGGAAGCGG GCGGCAAGCGCGCGGACGGCCGCCATCTCGTGAACGAGCTGAAGGCGAAGGGCTACGCGATCGCGCAGAACCGCGACGAG CTCCTCGCCGCCGATGCGACGAAGCGCGGCAAGCTCGCGGGCCTGTTCGCGTCGAGCCACATGAGCTACGACCTCGACCG CGGCGCGACGAAAGAGCCGAGCCTCGCCGACATGGCGACGCGCGCGCTCGACGTGCTGCAGAAGAACCCGAACGGCTATT TCCTGATGGTCGAAGGCGGGCGCATCGATCACGCGCTGCACGACACGAACGCGAAGCGCGCGCTGCAGGATACGGTCGCG TTCGACAACGCGATCAAGGCGACGCTCGACAAGGTGCGCCAGACCGATCCGGAGTTGAAGAACACGCTCGTCGTCGTGAC GGCCGACCACGATCACACGCTGGTGCTCAACGGCTACGCGGCGCGCACGGGCAAGACGGAAGCGGGCAAGCCGGGCGTGC TCGGCGTGCTGCGCAACTATCAGACGGGCGCGGTCGCGAAGGACGCGGACGGCGCGCCGTACACGATCATCGGCTTCGGC AACGGCGAGAACCGCGTGCAAGGCAGCCGCGCGGGCACGAGCCTCACCGACGCGGTGACGGGCGCGGACGATTATCGCCA GGAAGCGGTCGTGCGCATGGTCAAGGGCGGCGAGACGCACGGCGGCACCGACGTGTTCCTCGGCGCGATCGGCCGCGGCG CGGACGGCTTTCACGGCGTGATCGAGAACAACAAGGTGTTCGAGCTCGTGCGCGGCGCGGCGCAGCTCTGA
Upstream 100 bases:
>100_bases AATGCTTTCAATTCAATTCACATTCGCGTCACATCGCCCCCGTATCGTCCTGGCGTTTTTGAAAGAAATCACACCAACGG GAAGCCGAAACATGAAGCGA
Downstream 100 bases:
>100_bases GCGCGGCTTGACGGGAAACAGGGGAATACAGGATGTCGACTATCAAGCGCATCGCGGCGGCGGCGTTCGCCGCGGCGGCC CTCTCGGGCGGTTTCGGCCA
Product: alkaline phosphatase family protein
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MRLAALLGASVFAAAGCGSDEPKTPGASDNGAQTGAARNVIFFLGDGMGMTTLTAARIYALGEDGALTLDTLPETAFVKT YSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPSASLTGNCGANNGKPVPTLLEIAKAKGLATGVVTTTRVTHA TPAATYAHVCHRDAENDIAAQLVPGGAGYNAALGGGVDVVLGGGAQFFVPKEAGGKRADGRHLVNELKAKGYAIAQNRDE LLAADATKRGKLAGLFASSHMSYDLDRGATKEPSLADMATRALDVLQKNPNGYFLMVEGGRIDHALHDTNAKRALQDTVA FDNAIKATLDKVRQTDPELKNTLVVVTADHDHTLVLNGYAARTGKTEAGKPGVLGVLRNYQTGAVAKDADGAPYTIIGFG NGENRVQGSRAGTSLTDAVTGADDYRQEAVVRMVKGGETHGGTDVFLGAIGRGADGFHGVIENNKVFELVRGAAQL
Sequences:
>Translated_476_residues MRLAALLGASVFAAAGCGSDEPKTPGASDNGAQTGAARNVIFFLGDGMGMTTLTAARIYALGEDGALTLDTLPETAFVKT YSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPSASLTGNCGANNGKPVPTLLEIAKAKGLATGVVTTTRVTHA TPAATYAHVCHRDAENDIAAQLVPGGAGYNAALGGGVDVVLGGGAQFFVPKEAGGKRADGRHLVNELKAKGYAIAQNRDE LLAADATKRGKLAGLFASSHMSYDLDRGATKEPSLADMATRALDVLQKNPNGYFLMVEGGRIDHALHDTNAKRALQDTVA FDNAIKATLDKVRQTDPELKNTLVVVTADHDHTLVLNGYAARTGKTEAGKPGVLGVLRNYQTGAVAKDADGAPYTIIGFG NGENRVQGSRAGTSLTDAVTGADDYRQEAVVRMVKGGETHGGTDVFLGAIGRGADGFHGVIENNKVFELVRGAAQL >Mature_476_residues MRLAALLGASVFAAAGCGSDEPKTPGASDNGAQTGAARNVIFFLGDGMGMTTLTAARIYALGEDGALTLDTLPETAFVKT YSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPSASLTGNCGANNGKPVPTLLEIAKAKGLATGVVTTTRVTHA TPAATYAHVCHRDAENDIAAQLVPGGAGYNAALGGGVDVVLGGGAQFFVPKEAGGKRADGRHLVNELKAKGYAIAQNRDE LLAADATKRGKLAGLFASSHMSYDLDRGATKEPSLADMATRALDVLQKNPNGYFLMVEGGRIDHALHDTNAKRALQDTVA FDNAIKATLDKVRQTDPELKNTLVVVTADHDHTLVLNGYAARTGKTEAGKPGVLGVLRNYQTGAVAKDADGAPYTIIGFG NGENRVQGSRAGTSLTDAVTGADDYRQEAVVRMVKGGETHGGTDVFLGAIGRGADGFHGVIENNKVFELVRGAAQL
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=479, Percent_Identity=37.5782881002088, Blast_Score=255, Evalue=5e-68, Organism=Homo sapiens, GI116734717, Length=473, Percent_Identity=36.3636363636364, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI94721246, Length=479, Percent_Identity=37.160751565762, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI157266292, Length=474, Percent_Identity=36.4978902953587, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI294660770, Length=465, Percent_Identity=35.9139784946237, Blast_Score=242, Evalue=7e-64, Organism=Homo sapiens, GI294660772, Length=433, Percent_Identity=34.1801385681293, Blast_Score=210, Evalue=2e-54, Organism=Escherichia coli, GI48994877, Length=410, Percent_Identity=32.6829268292683, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320689, Length=339, Percent_Identity=34.2182890855457, Blast_Score=154, Evalue=4e-38, Organism=Drosophila melanogaster, GI21355151, Length=470, Percent_Identity=37.2340425531915, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI85725200, Length=459, Percent_Identity=35.7298474945534, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI85815833, Length=459, Percent_Identity=35.7298474945534, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24585213, Length=469, Percent_Identity=35.8208955223881, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI21355981, Length=458, Percent_Identity=35.1528384279476, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI21358067, Length=480, Percent_Identity=36.0416666666667, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI18859923, Length=465, Percent_Identity=37.4193548387097, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24651554, Length=477, Percent_Identity=36.6876310272537, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI19921912, Length=485, Percent_Identity=35.2577319587629, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI21355149, Length=475, Percent_Identity=33.2631578947368, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24657827, Length=477, Percent_Identity=33.7526205450734, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24651556, Length=468, Percent_Identity=35.6837606837607, Blast_Score=201, Evalue=7e-52, Organism=Drosophila melanogaster, GI24657835, Length=470, Percent_Identity=32.1276595744681, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24657842, Length=470, Percent_Identity=31.063829787234, Blast_Score=187, Evalue=1e-47,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 49217; Mature: 49217
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAALLGASVFAAAGCGSDEPKTPGASDNGAQTGAARNVIFFLGDGMGMTTLTAARIYA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHEEEEEEEE LGEDGALTLDTLPETAFVKTYSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPS ECCCCCEEEECCCCEEEEEEECCCCEECCCCCCCCHHEEECCCCCEEEEECCCCCCCCCC ASLTGNCGANNGKPVPTLLEIAKAKGLATGVVTTTRVTHATPAATYAHVCHRDAENDIAA CCCCCCCCCCCCCCCHHHHHHHHHCCCEECEEEEEEEECCCCHHHHHHHHHCCCCCCCEE QLVPGGAGYNAALGGGVDVVLGGGAQFFVPKEAGGKRADGRHLVNELKAKGYAIAQNRDE EEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEECCCCC LLAADATKRGKLAGLFASSHMSYDLDRGATKEPSLADMATRALDVLQKNPNGYFLMVEGG EEECCCCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC RIDHALHDTNAKRALQDTVAFDNAIKATLDKVRQTDPELKNTLVVVTADHDHTLVLNGYA CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCEEEEECEE ARTGKTEAGKPGVLGVLRNYQTGAVAKDADGAPYTIIGFGNGENRVQGSRAGTSLTDAVT CCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHC GADDYRQEAVVRMVKGGETHGGTDVFLGAIGRGADGFHGVIENNKVFELVRGAAQL CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHCC >Mature Secondary Structure MRLAALLGASVFAAAGCGSDEPKTPGASDNGAQTGAARNVIFFLGDGMGMTTLTAARIYA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHEEEEEEEE LGEDGALTLDTLPETAFVKTYSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPS ECCCCCEEEECCCCEEEEEEECCCCEECCCCCCCCHHEEECCCCCEEEEECCCCCCCCCC ASLTGNCGANNGKPVPTLLEIAKAKGLATGVVTTTRVTHATPAATYAHVCHRDAENDIAA CCCCCCCCCCCCCCCHHHHHHHHHCCCEECEEEEEEEECCCCHHHHHHHHHCCCCCCCEE QLVPGGAGYNAALGGGVDVVLGGGAQFFVPKEAGGKRADGRHLVNELKAKGYAIAQNRDE EEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEECCCCC LLAADATKRGKLAGLFASSHMSYDLDRGATKEPSLADMATRALDVLQKNPNGYFLMVEGG EEECCCCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC RIDHALHDTNAKRALQDTVAFDNAIKATLDKVRQTDPELKNTLVVVTADHDHTLVLNGYA CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCEEEEECEE ARTGKTEAGKPGVLGVLRNYQTGAVAKDADGAPYTIIGFGNGENRVQGSRAGTSLTDAVT CCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHC GADDYRQEAVVRMVKGGETHGGTDVFLGAIGRGADGFHGVIENNKVFELVRGAAQL CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]