| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454016
Identifier: 126454016
GI number: 126454016
Start: 2116231
End: 2116587
Strand: Direct
Name: 126454016
Synonym: BURPS1106A_2124
Alternate gene names: NA
Gene position: 2116231-2116587 (Clockwise)
Preceding gene: 126453229
Following gene: 126451675
Centisome position: 53.06
GC content: 64.71
Gene sequence:
>357_bases TTGACGCGCGCGTCGGCGCGCATGAGCGCCGCGCGGCCGGGGACACGCCTGTCGCGCGGCGGCCGGGCGTCTGATGTCCG GCGTTTGGCGTCCGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCG TTTGGCGTTTGGCATCCGCATCCGCATCCGCATCCGCATCTTGCATCTTGCATCTTGCATCTTGCATCTTGCTTCTTGCT TCCGGCTTCCGGCGCATCCGGACGCCGCCGACATCGGCCCCCGTCCCCCGCGCCGCGCCAGCCCCCAATATTTCGGTTTG CTTTCAATTGTTTCGGATTGTCGTCGGCGATCCGTGA
Upstream 100 bases:
>100_bases GCTGCCCGCCGTTGTCCAAGGAGCGCAAGCGCCGCGAAAAGGCCGGCTTGCCGCTCACGCCCGTCGGCAAGGACGGACGG TACATCCCGATCGAGCGGGT
Downstream 100 bases:
>100_bases GCCGAAAAACCGTGGCAATCTACAGTGCAATCCGGTTGTCCATTCGCGCAACCGATCTGTAAGGTTTCCCGATGATCCGT CTTGCGACATTCGCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTRASARMSAARPGTRLSRGGRASDVRRLASGVWRLAFGVWRLAFGVWRLAFGVWRLASASASASASCILHLASCILLLA SGFRRIRTPPTSAPVPRAAPAPNISVCFQLFRIVVGDP
Sequences:
>Translated_118_residues MTRASARMSAARPGTRLSRGGRASDVRRLASGVWRLAFGVWRLAFGVWRLAFGVWRLASASASASASCILHLASCILLLA SGFRRIRTPPTSAPVPRAAPAPNISVCFQLFRIVVGDP >Mature_117_residues TRASARMSAARPGTRLSRGGRASDVRRLASGVWRLAFGVWRLAFGVWRLAFGVWRLASASASASASCILHLASCILLLAS GFRRIRTPPTSAPVPRAAPAPNISVCFQLFRIVVGDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12634; Mature: 12503
Theoretical pI: Translated: 12.76; Mature: 12.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRASARMSAARPGTRLSRGGRASDVRRLASGVWRLAFGVWRLAFGVWRLAFGVWRLASA CCCCHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SASASASCILHLASCILLLASGFRRIRTPPTSAPVPRAAPAPNISVCFQLFRIVVGDP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TRASARMSAARPGTRLSRGGRASDVRRLASGVWRLAFGVWRLAFGVWRLAFGVWRLASA CCCHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SASASASCILHLASCILLLASGFRRIRTPPTSAPVPRAAPAPNISVCFQLFRIVVGDP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA