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The map label for this gene is ssb [H]

Identifier: 126453998

GI number: 126453998

Start: 581747

End: 582301

Strand: Direct

Name: ssb [H]

Synonym: BURPS1106A_0611

Alternate gene names: 126453998

Gene position: 581747-582301 (Clockwise)

Preceding gene: 126452737

Following gene: 126454384

Centisome position: 14.59

GC content: 70.09

Gene sequence:

>555_bases
ATGGCATCCGTCAACAAGGTCATTCTCGTCGGCAACCTCGGCGCCGATCCCGAAGTGCGTTATCTGCCAAGCGGCGACGC
GGTGGCAAACATCCGCCTCGCGACGACCGACCGCTACAAGGACAAGGCGTCCGGCGAATTCAAGGAAATGACCGAGTGGC
ACCGCGTCGCGTTCTTCGGGCGCCTTGCCGAGATCGTCAACGAGTATCTGAAGAAGGGCTCGTCGGTGTACATCGAAGGC
CGGATCCGCACGCGCAAGTGGCAAGGCCAGGACGGCCAGGACCGTTACTCGACCGAAATCGTCGCCGACCAGATGCAGAT
GCTCGGCGGCCGCGGCGGTTCGGGCGGCGGTGGCGGCGGCGGTGACGACGGCGGCTACGGTGGCGGCGGCGGCGGTTACG
GCGGCGGCCGGGACATGGAGCGCGGCGGCGGTGGCGGCCGTGCGTCGGGTGGCGGCGGCGCGGGTGCGCGCAGCGGCGGC
GGTGGCGGCGCGAGCCGGCCGAGCGCCCCGGCGGGCGGCGGGTTCGACGAGATGGACGACGATATTCCGTTCTGA

Upstream 100 bases:

>100_bases
TTCGAAGCGCGCGGCGTGCTCCGGTCCGGCACACGCCGGGCCGATGAAGCCCTGAACGGTTTTGCCGCGCTGTTTGGCAT
CGAATCAACTGGAGAAACAC

Downstream 100 bases:

>100_bases
GTCGCGCAACCGCGGCATGCAGAAATCAACCCCGCCCTTGCGCGGGGTTTTTCTTTTCTCCGTCGTTCAGACGGAGGGCG
CGAATTCGACCGCGCTTCAA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGEFKEMTEWHRVAFFGRLAEIVNEYLKKGSSVYIEG
RIRTRKWQGQDGQDRYSTEIVADQMQMLGGRGGSGGGGGGGDDGGYGGGGGGYGGGRDMERGGGGGRASGGGGAGARSGG
GGGASRPSAPAGGGFDEMDDDIPF

Sequences:

>Translated_184_residues
MASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGEFKEMTEWHRVAFFGRLAEIVNEYLKKGSSVYIEG
RIRTRKWQGQDGQDRYSTEIVADQMQMLGGRGGSGGGGGGGDDGGYGGGGGGYGGGRDMERGGGGGRASGGGGAGARSGG
GGGASRPSAPAGGGFDEMDDDIPF
>Mature_183_residues
ASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGEFKEMTEWHRVAFFGRLAEIVNEYLKKGSSVYIEGR
IRTRKWQGQDGQDRYSTEIVADQMQMLGGRGGSGGGGGGGDDGGYGGGGGGYGGGRDMERGGGGGRASGGGGAGARSGGG
GGASRPSAPAGGGFDEMDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=189, Percent_Identity=55.026455026455, Blast_Score=175, Evalue=1e-45,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18720; Mature: 18589

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGEFKEMTEWHRVAFFG
CCCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RLAEIVNEYLKKGSSVYIEGRIRTRKWQGQDGQDRYSTEIVADQMQMLGGRGGSGGGGGG
HHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDDGGYGGGGGGYGGGRDMERGGGGGRASGGGGAGARSGGGGGASRPSAPAGGGFDEMDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DIPF
CCCC
>Mature Secondary Structure 
ASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGEFKEMTEWHRVAFFG
CCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RLAEIVNEYLKKGSSVYIEGRIRTRKWQGQDGQDRYSTEIVADQMQMLGGRGGSGGGGGG
HHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDDGGYGGGGGGYGGGRDMERGGGGGRASGGGGAGARSGGGGGASRPSAPAGGGFDEMDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DIPF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948488 [H]