Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126454384

Identifier: 126454384

GI number: 126454384

Start: 583488

End: 585068

Strand: Direct

Name: 126454384

Synonym: BURPS1106A_0614

Alternate gene names: NA

Gene position: 583488-585068 (Clockwise)

Preceding gene: 126453998

Following gene: 126452526

Centisome position: 14.63

GC content: 68.44

Gene sequence:

>1581_bases
ATGAATCCATTCTTTGGCGCGCAGCGCGAATGGCAGGACGTACCGGTTCCGGCGCGGGCATATGCAAGGCTCGACAATCT
CCACCTGCCTCACGCGGATGCGCCCGATCGGCGGGCGGCGCTGCGCTTCGATCTGATCGACGCCGACTGGCTCGACGATC
AGGCGGGCGCCGACAATCCGCTGTTCGATCTCGGGCGTCCGCACCGCATGCGCGCCGCGTGGAAGCGCTGGTTCGCCGCC
GCGCGGGGCGGCGACGCGGACGATCCGTTCCGCGCGGCGCCGTTGTATGTGCTCGAAGTGAGCGTGCCGTTCGACGCACG
CGAATGGCGCAAGCGCCTCGGTTTGACGCGAGAAGCGATGGCGAACGACGCTCACGGCGAAATCCTGGCGGCGTTTCGCC
GGCGCTGGTATGAACTGACGGTGTTGCGCGAAGCCGACGCGCGGGCGGGGGCGATGTTCGGCTTGCTCCATCGCGGCGTC
GCCGACGAGGGGCTGCGGGTTTGCTGCTTCGCTGCACTCGCGCCGGCCGCGCATGCGGCCGGGCTGACGGCGCTCGGCAC
GCTGGCGGGCAGCCCGGCGCTGACGAGCGCGAGCCTGAAGCCGCTCGTGTGCGACGTGCGGGCGACGTATCTGGGCGTCT
ACGACGTCGGGCAGGCGAATGCCAATGCGCTGCTGGGCGGGATACGCGGGCGGGACCTTCATGGGGTGGTTCGGCACGGT
GTGTTTCCGACGCTCTATTTCGATCTGGGCATGCCGTTGCAGTCGCAGCGCCACACGGCGCCGTCGAACGTTCGGTTCTG
CTTCACGGCGGAACCGCCCATCGTTCTTTCGCACTGGCACGACGATCATCTGGGCGGCGTTGCGTTGCCGACGGCGGCCG
GCTGCCCGACTTCCCAGCAGATGGACTGGATCGTGCCGGACTATTCGCTTGCGACACGGCACAAGGCGCTGGTGACGGCG
ATCTGGGCGGCGGGCGGCAGCGTTCACGTGTTCAGCGCGTCGCCGGCCGGCCGGCGGTTGCAGGCCGCGACGGCGAGCGG
GCATCTGCTGACGCTCACGCGCGGCACCGCCCGAGACCCGAACAACGGCGGCATCGTCATGCAGGTGAGTTCAGCGCAGC
AACAGGCGCGCCGCTTCGCCGATCCCCCCCGAAGCTGGCTGCTGCCCGGCGACTGCGATTACAAGCATTTTCCTTCGACT
TTCACGCCGACGAACGTGATCGCGCTCGTCGCGCCGCATCACGGCGCGGACCTGAGGAAAGGGTCGGTTCCGGTGCCGCC
CGCCGCGAGCGGTTATTTGCGGCTCGTCTATTCGTTCGGGCGAGACAACAAGTACCAACATCCGCGTCAGGGCTTCGTGG
ATGCGCATCATGCCGCCGGCTGGACCCATCCGGTCGTGCCGGCGACGGGGGCGATCACCTGCGTGTCGGGAGACGACGTG
CGCACGACCAATGTGCATTCGCCGTGGTCCGCGAAACCGAGGGGCGTGCTGGTGGGATGGTCGAAGGCGCCGCATTCGGT
TCCGGCCTGTACGCTGGGCGGCGGCGCGACGAATTGCACGTTGCCGCTTGCGAAAGTCTGA

Upstream 100 bases:

>100_bases
AAAGTGACGGAGAAAAATCGGCGGAAGAATTGAAATCGCGTCGCGAGCATTTCCGCGCGCGGATAACCACAACGCAAGAA
CAAGAAAAACGGGGCATTCG

Downstream 100 bases:

>100_bases
GCCGCCGTCACGGGCGCTCGGTCGATCGAGCCGTCGCCGGCATCCGCCGTTCGGGCGAGGCCGGCGATGGGGCGTTTCGG
TTGATTCGTTCGGTGCGTTC

Product: Zn-dependent hydrolases, including glyoxylases

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MNPFFGAQREWQDVPVPARAYARLDNLHLPHADAPDRRAALRFDLIDADWLDDQAGADNPLFDLGRPHRMRAAWKRWFAA
ARGGDADDPFRAAPLYVLEVSVPFDAREWRKRLGLTREAMANDAHGEILAAFRRRWYELTVLREADARAGAMFGLLHRGV
ADEGLRVCCFAALAPAAHAAGLTALGTLAGSPALTSASLKPLVCDVRATYLGVYDVGQANANALLGGIRGRDLHGVVRHG
VFPTLYFDLGMPLQSQRHTAPSNVRFCFTAEPPIVLSHWHDDHLGGVALPTAAGCPTSQQMDWIVPDYSLATRHKALVTA
IWAAGGSVHVFSASPAGRRLQAATASGHLLTLTRGTARDPNNGGIVMQVSSAQQQARRFADPPRSWLLPGDCDYKHFPST
FTPTNVIALVAPHHGADLRKGSVPVPPAASGYLRLVYSFGRDNKYQHPRQGFVDAHHAAGWTHPVVPATGAITCVSGDDV
RTTNVHSPWSAKPRGVLVGWSKAPHSVPACTLGGGATNCTLPLAKV

Sequences:

>Translated_526_residues
MNPFFGAQREWQDVPVPARAYARLDNLHLPHADAPDRRAALRFDLIDADWLDDQAGADNPLFDLGRPHRMRAAWKRWFAA
ARGGDADDPFRAAPLYVLEVSVPFDAREWRKRLGLTREAMANDAHGEILAAFRRRWYELTVLREADARAGAMFGLLHRGV
ADEGLRVCCFAALAPAAHAAGLTALGTLAGSPALTSASLKPLVCDVRATYLGVYDVGQANANALLGGIRGRDLHGVVRHG
VFPTLYFDLGMPLQSQRHTAPSNVRFCFTAEPPIVLSHWHDDHLGGVALPTAAGCPTSQQMDWIVPDYSLATRHKALVTA
IWAAGGSVHVFSASPAGRRLQAATASGHLLTLTRGTARDPNNGGIVMQVSSAQQQARRFADPPRSWLLPGDCDYKHFPST
FTPTNVIALVAPHHGADLRKGSVPVPPAASGYLRLVYSFGRDNKYQHPRQGFVDAHHAAGWTHPVVPATGAITCVSGDDV
RTTNVHSPWSAKPRGVLVGWSKAPHSVPACTLGGGATNCTLPLAKV
>Mature_526_residues
MNPFFGAQREWQDVPVPARAYARLDNLHLPHADAPDRRAALRFDLIDADWLDDQAGADNPLFDLGRPHRMRAAWKRWFAA
ARGGDADDPFRAAPLYVLEVSVPFDAREWRKRLGLTREAMANDAHGEILAAFRRRWYELTVLREADARAGAMFGLLHRGV
ADEGLRVCCFAALAPAAHAAGLTALGTLAGSPALTSASLKPLVCDVRATYLGVYDVGQANANALLGGIRGRDLHGVVRHG
VFPTLYFDLGMPLQSQRHTAPSNVRFCFTAEPPIVLSHWHDDHLGGVALPTAAGCPTSQQMDWIVPDYSLATRHKALVTA
IWAAGGSVHVFSASPAGRRLQAATASGHLLTLTRGTARDPNNGGIVMQVSSAQQQARRFADPPRSWLLPGDCDYKHFPST
FTPTNVIALVAPHHGADLRKGSVPVPPAASGYLRLVYSFGRDNKYQHPRQGFVDAHHAAGWTHPVVPATGAITCVSGDDV
RTTNVHSPWSAKPRGVLVGWSKAPHSVPACTLGGGATNCTLPLAKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56697; Mature: 56697

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFFGAQREWQDVPVPARAYARLDNLHLPHADAPDRRAALRFDLIDADWLDDQAGADNP
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
LFDLGRPHRMRAAWKRWFAAARGGDADDPFRAAPLYVLEVSVPFDAREWRKRLGLTREAM
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHH
ANDAHGEILAAFRRRWYELTVLREADARAGAMFGLLHRGVADEGLRVCCFAALAPAAHAA
CCCCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
GLTALGTLAGSPALTSASLKPLVCDVRATYLGVYDVGQANANALLGGIRGRDLHGVVRHG
CHHHHHHHCCCCCCCCCCCCCEEEECEEEEEEEEECCCCCCHHEEECCCCCCHHHHHHHC
VFPTLYFDLGMPLQSQRHTAPSNVRFCFTAEPPIVLSHWHDDHLGGVALPTAAGCPTSQQ
CCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEECCCCCCCCCCCC
MDWIVPDYSLATRHKALVTAIWAAGGSVHVFSASPAGRRLQAATASGHLLTLTRGTARDP
CCEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCC
NNGGIVMQVSSAQQQARRFADPPRSWLLPGDCDYKHFPSTFTPTNVIALVAPHHGADLRK
CCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
GSVPVPPAASGYLRLVYSFGRDNKYQHPRQGFVDAHHAAGWTHPVVPATGAITCVSGDDV
CCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCE
RTTNVHSPWSAKPRGVLVGWSKAPHSVPACTLGGGATNCTLPLAKV
EECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCEECCCC
>Mature Secondary Structure
MNPFFGAQREWQDVPVPARAYARLDNLHLPHADAPDRRAALRFDLIDADWLDDQAGADNP
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
LFDLGRPHRMRAAWKRWFAAARGGDADDPFRAAPLYVLEVSVPFDAREWRKRLGLTREAM
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHH
ANDAHGEILAAFRRRWYELTVLREADARAGAMFGLLHRGVADEGLRVCCFAALAPAAHAA
CCCCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
GLTALGTLAGSPALTSASLKPLVCDVRATYLGVYDVGQANANALLGGIRGRDLHGVVRHG
CHHHHHHHCCCCCCCCCCCCCEEEECEEEEEEEEECCCCCCHHEEECCCCCCHHHHHHHC
VFPTLYFDLGMPLQSQRHTAPSNVRFCFTAEPPIVLSHWHDDHLGGVALPTAAGCPTSQQ
CCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEECCCCCCCCCCCC
MDWIVPDYSLATRHKALVTAIWAAGGSVHVFSASPAGRRLQAATASGHLLTLTRGTARDP
CCEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCC
NNGGIVMQVSSAQQQARRFADPPRSWLLPGDCDYKHFPSTFTPTNVIALVAPHHGADLRK
CCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
GSVPVPPAASGYLRLVYSFGRDNKYQHPRQGFVDAHHAAGWTHPVVPATGAITCVSGDDV
CCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCE
RTTNVHSPWSAKPRGVLVGWSKAPHSVPACTLGGGATNCTLPLAKV
EECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA