| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453986
Identifier: 126453986
GI number: 126453986
Start: 3095278
End: 3095700
Strand: Direct
Name: 126453986
Synonym: BURPS1106A_3179
Alternate gene names: NA
Gene position: 3095278-3095700 (Clockwise)
Preceding gene: 126452508
Following gene: 126454973
Centisome position: 77.61
GC content: 66.9
Gene sequence:
>423_bases ATGTCACGCGTGAGGTCAACGTTCGACGTCACGCTTCGCACCGGGCACCACGGCACCCCTCACGCCGCCCCTCACGTCGC GCTGCGCGGCGCCCTGCGCGCCATCTCGCGGCTCGACCGGCCCCGCCCCTCATTCGCGGGCGGCTCGCATTCGCTCATCC CCGCATCCGCTTTCCGTCCGGCCGTGCACCGTGCATCACGCATCGCACGCCCGAGCCAACGCTCGCGGCTACCCGCCGCG TCGGCCGGATGCGTCCGGGGCTTTTTACGCTTTCCCGCATCGACCCGCGAGTTTTGCGACAATGTCGGACTTACTTCGCG CCGTCGCTTTCAAACGCCTAACGTTCTCCGCCGATGTCGTTGCCCCATATCGATCCGCTGTATTCCCTGTCCGGCCTCTT CGTCGGTTTTCTCGTCGGCTTGA
Upstream 100 bases:
>100_bases GCGCGCGTCCCGCCGCATCGTTGCTCGCCGCATCGGGCACGTTCGCCTTCGATCGCCGGCAGTCCGCACGGCGCCGGCGG CGCGCGGGCGCTCGCGCTTC
Downstream 100 bases:
>100_bases CGGGCGTCGGCGGCGGTTCGCTGATGACGCCGATCCTCGTGCTGCTGTTCAACGTCCATCCGGCGACGGCGGTGGGCACC GATCTGCTTTACGCGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSRVRSTFDVTLRTGHHGTPHAAPHVALRGALRAISRLDRPRPSFAGGSHSLIPASAFRPAVHRASRIARPSQRSRLPAA SAGCVRGFLRFPASTREFCDNVGLTSRRRFQTPNVLRRCRCPISIRCIPCPASSSVFSSA
Sequences:
>Translated_140_residues MSRVRSTFDVTLRTGHHGTPHAAPHVALRGALRAISRLDRPRPSFAGGSHSLIPASAFRPAVHRASRIARPSQRSRLPAA SAGCVRGFLRFPASTREFCDNVGLTSRRRFQTPNVLRRCRCPISIRCIPCPASSSVFSSA >Mature_139_residues SRVRSTFDVTLRTGHHGTPHAAPHVALRGALRAISRLDRPRPSFAGGSHSLIPASAFRPAVHRASRIARPSQRSRLPAAS AGCVRGFLRFPASTREFCDNVGLTSRRRFQTPNVLRRCRCPISIRCIPCPASSSVFSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15256; Mature: 15125
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVRSTFDVTLRTGHHGTPHAAPHVALRGALRAISRLDRPRPSFAGGSHSLIPASAFRP CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH AVHRASRIARPSQRSRLPAASAGCVRGFLRFPASTREFCDNVGLTSRRRFQTPNVLRRCR HHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHC CPISIRCIPCPASSSVFSSA CCCEEEEEECCCCCCCCCCC >Mature Secondary Structure SRVRSTFDVTLRTGHHGTPHAAPHVALRGALRAISRLDRPRPSFAGGSHSLIPASAFRP CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH AVHRASRIARPSQRSRLPAASAGCVRGFLRFPASTREFCDNVGLTSRRRFQTPNVLRRCR HHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHC CPISIRCIPCPASSSVFSSA CCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA