| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is pur8 [H]
Identifier: 126452508
GI number: 126452508
Start: 3093698
End: 3095140
Strand: Direct
Name: pur8 [H]
Synonym: BURPS1106A_3178
Alternate gene names: 126452508
Gene position: 3093698-3095140 (Clockwise)
Preceding gene: 126451691
Following gene: 126453986
Centisome position: 77.57
GC content: 71.59
Gene sequence:
>1443_bases ATGACCCACGGTCTGCACGGCCCCAAGCGCTGGTATGCGCTCGTCGTTCTCTGTCTGGGCGTGCTGATGATCGTGCTCGA TTCGACGATCGTCAACGTCGCGCTGCCGTCGATCGGCGCGGACCTGCACTTCACCGAAACCGCGCTCGTCTGGATCGTGA ACGCTTACATGCTGACGTTCGGCGGCTGCCTGCTGCTGGGCGGCCGGCTCGGCGATCTGTACGGCCAGCGCCGGATGTTC CTCGCCGGCCTCACGCTGTTCACGCTCGCATCGCTCGCGTGCGGGCTCGCGCCAACGCAGTTCGTGCTGATCGCCGCGCG CGCGGTGCAGGGGTTCGGTGGCGCGGTGGTGTCCGCCGTCGCGCTGTCGCTCATCATGAATCTCTTCACCGAGCCGGGCG AGCGCGCGAAGGCGATGGGCGTCTACAGCTTCGTCTGCGCGGGCGGCGGCAGCCTCGGCGTACTGCTCGGCGGCGTCCTC ACGAGCGTGCTCAGCTGGCACTGGATCTTCCTCGTCAATCTGCCGATCGGCGTCGCCGCGTACGCGCTGTCCGCCGCGCT GCTGCCGAAGGTGCGCCCGCAGGCGGCCGACGCGCGGCTCGACGTCGCGGGCGCGATCGCCGTGACCGCTTCGCTGATGC TCGCCGTCTACGGCATCGTCAACGGCAACGAGGCCGGCTGGCTGTCGACGCAGACGGTCGCGACGCTCGCAGGCGCGGCC GCGCTGCTCGCGGCGTTCATCGCGATCGAGACGCGCGCCGCGCATCCGCTGATGCCGCTCGCGCTCGCCACGCAGCGCAA CGTCGCGGTCGCGAACGTGATCGGCGTGCTGTGGGCGGCCGCGATGTTCGCGTGGTTCTTTCTCTCCGCGCTCTACATGC AGCGCGTGCTCGGCTACGGGCCGCTCCAGGTCGGCCTGGCGTTTCTGCCCGCGAACCTGATCATGGCCGCGTTCTCGCTC GGCTTGTCCGCGAGGATCGTGATGCGCTTCGGCATCCGCCGCGCGATCGGCGCCGGGCTCGTCATCGCGGCCGCGGGCCT TGCCCTCTTCGCGCGTGCACCCGCCGACGGCGGCTTCGTCGCGCACGTGCTGCCGGGGATGATACTCGTCGGCGTCGGCG CGGGCGTCGCGTTCAATCCGGTGCTGCTCGCCGCGATGAGCGACGTCGCGCCGAGCGATTCGGGGCTTGCCTCGGGCATC GTCAACACCTCGTTCATGATGGGCGGCGCCCTCGGCCTCGCGGTGCTCGCGAGCGTCGCGTCCGCGCGCACCGACGCGCT CGCCGCCGCACGCGCGGCGCTGCCCGTCGCGCTCAACGGCGGCTATCACGCGGCGTTCGCGTGCGGCGCGGCATTCGCGG CGCTGGCCGCCGGTCTCGCGTACGCGCTGCGCATCCGCGCGCAATCGAACGCCGCGGCCGAACTGCACGGCGCCGCGCAC TGA
Upstream 100 bases:
>100_bases CCGCGGCCCGCACGCAAGCGAACGGCTTGTCAGCAACCGGCAGGAAGGCAACTCACGACACGCTTACAATGCTGCCTCCC ACCCTTCGGAGGCATTCCCG
Downstream 100 bases:
>100_bases GCGCGGGAAGACGGCGGCGCGCTGCCGTCAGCGCATCGCGCGCGTCCCGCCGCATCGTTGCTCGCCGCATCGGGCACGTT CGCCTTCGATCGCCGGCAGT
Product: EmrB/QacA family drug resistance transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MTHGLHGPKRWYALVVLCLGVLMIVLDSTIVNVALPSIGADLHFTETALVWIVNAYMLTFGGCLLLGGRLGDLYGQRRMF LAGLTLFTLASLACGLAPTQFVLIAARAVQGFGGAVVSAVALSLIMNLFTEPGERAKAMGVYSFVCAGGGSLGVLLGGVL TSVLSWHWIFLVNLPIGVAAYALSAALLPKVRPQAADARLDVAGAIAVTASLMLAVYGIVNGNEAGWLSTQTVATLAGAA ALLAAFIAIETRAAHPLMPLALATQRNVAVANVIGVLWAAAMFAWFFLSALYMQRVLGYGPLQVGLAFLPANLIMAAFSL GLSARIVMRFGIRRAIGAGLVIAAAGLALFARAPADGGFVAHVLPGMILVGVGAGVAFNPVLLAAMSDVAPSDSGLASGI VNTSFMMGGALGLAVLASVASARTDALAAARAALPVALNGGYHAAFACGAAFAALAAGLAYALRIRAQSNAAAELHGAAH
Sequences:
>Translated_480_residues MTHGLHGPKRWYALVVLCLGVLMIVLDSTIVNVALPSIGADLHFTETALVWIVNAYMLTFGGCLLLGGRLGDLYGQRRMF LAGLTLFTLASLACGLAPTQFVLIAARAVQGFGGAVVSAVALSLIMNLFTEPGERAKAMGVYSFVCAGGGSLGVLLGGVL TSVLSWHWIFLVNLPIGVAAYALSAALLPKVRPQAADARLDVAGAIAVTASLMLAVYGIVNGNEAGWLSTQTVATLAGAA ALLAAFIAIETRAAHPLMPLALATQRNVAVANVIGVLWAAAMFAWFFLSALYMQRVLGYGPLQVGLAFLPANLIMAAFSL GLSARIVMRFGIRRAIGAGLVIAAAGLALFARAPADGGFVAHVLPGMILVGVGAGVAFNPVLLAAMSDVAPSDSGLASGI VNTSFMMGGALGLAVLASVASARTDALAAARAALPVALNGGYHAAFACGAAFAALAAGLAYALRIRAQSNAAAELHGAAH >Mature_479_residues THGLHGPKRWYALVVLCLGVLMIVLDSTIVNVALPSIGADLHFTETALVWIVNAYMLTFGGCLLLGGRLGDLYGQRRMFL AGLTLFTLASLACGLAPTQFVLIAARAVQGFGGAVVSAVALSLIMNLFTEPGERAKAMGVYSFVCAGGGSLGVLLGGVLT SVLSWHWIFLVNLPIGVAAYALSAALLPKVRPQAADARLDVAGAIAVTASLMLAVYGIVNGNEAGWLSTQTVATLAGAAA LLAAFIAIETRAAHPLMPLALATQRNVAVANVIGVLWAAAMFAWFFLSALYMQRVLGYGPLQVGLAFLPANLIMAAFSLG LSARIVMRFGIRRAIGAGLVIAAAGLALFARAPADGGFVAHVLPGMILVGVGAGVAFNPVLLAAMSDVAPSDSGLASGIV NTSFMMGGALGLAVLASVASARTDALAAARAALPVALNGGYHAAFACGAAFAALAAGLAYALRIRAQSNAAAELHGAAH
Specific function: May be involved in active puromycin efflux energized by a proton-dependent electrochemical gradient. In addition, it could be implicated in secreting N-acetylpuromycin, the last intermediate of the puromycin biosynthesis pathway, to the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=423, Percent_Identity=31.6784869976359, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI1790195, Length=407, Percent_Identity=29.7297297297297, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1789042, Length=420, Percent_Identity=26.4285714285714, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788710, Length=315, Percent_Identity=27.3015873015873, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788392, Length=358, Percent_Identity=29.608938547486, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1790146, Length=166, Percent_Identity=28.3132530120482, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324954, Length=451, Percent_Identity=25.9423503325942, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6319770, Length=397, Percent_Identity=24.4332493702771, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323520, Length=449, Percent_Identity=25.1670378619154, Blast_Score=76, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6325455, Length=516, Percent_Identity=22.2868217054264, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321663, Length=154, Percent_Identity=30.5194805194805, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48730; Mature: 48599
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGLHGPKRWYALVVLCLGVLMIVLDSTIVNVALPSIGADLHFTETALVWIVNAYMLTF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH GGCLLLGGRLGDLYGQRRMFLAGLTLFTLASLACGLAPTQFVLIAARAVQGFGGAVVSAV CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH ALSLIMNLFTEPGERAKAMGVYSFVCAGGGSLGVLLGGVLTSVLSWHWIFLVNLPIGVAA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHH YALSAALLPKVRPQAADARLDVAGAIAVTASLMLAVYGIVNGNEAGWLSTQTVATLAGAA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ALLAAFIAIETRAAHPLMPLALATQRNVAVANVIGVLWAAAMFAWFFLSALYMQRVLGYG HHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLQVGLAFLPANLIMAAFSLGLSARIVMRFGIRRAIGAGLVIAAAGLALFARAPADGGFV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AHVLPGMILVGVGAGVAFNPVLLAAMSDVAPSDSGLASGIVNTSFMMGGALGLAVLASVA HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SARTDALAAARAALPVALNGGYHAAFACGAAFAALAAGLAYALRIRAQSNAAAELHGAAH HHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCC >Mature Secondary Structure THGLHGPKRWYALVVLCLGVLMIVLDSTIVNVALPSIGADLHFTETALVWIVNAYMLTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH GGCLLLGGRLGDLYGQRRMFLAGLTLFTLASLACGLAPTQFVLIAARAVQGFGGAVVSAV CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH ALSLIMNLFTEPGERAKAMGVYSFVCAGGGSLGVLLGGVLTSVLSWHWIFLVNLPIGVAA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHH YALSAALLPKVRPQAADARLDVAGAIAVTASLMLAVYGIVNGNEAGWLSTQTVATLAGAA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ALLAAFIAIETRAAHPLMPLALATQRNVAVANVIGVLWAAAMFAWFFLSALYMQRVLGYG HHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLQVGLAFLPANLIMAAFSLGLSARIVMRFGIRRAIGAGLVIAAAGLALFARAPADGGFV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AHVLPGMILVGVGAGVAFNPVLLAAMSDVAPSDSGLASGIVNTSFMMGGALGLAVLASVA HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SARTDALAAARAALPVALNGGYHAAFACGAAFAALAAGLAYALRIRAQSNAAAELHGAAH HHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7916693 [H]