| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is pgsA [H]
Identifier: 126453875
GI number: 126453875
Start: 2783147
End: 2783740
Strand: Reverse
Name: pgsA [H]
Synonym: BURPS1106A_2828
Alternate gene names: 126453875
Gene position: 2783740-2783147 (Counterclockwise)
Preceding gene: 126454241
Following gene: 126452077
Centisome position: 69.79
GC content: 63.64
Gene sequence:
>594_bases ATGCCGTTCAATTTCCCGATTTTCCTGACGTGGGTGCGAATCGTGCTGATTCCGCTCGTCGTCGGTGTGTTTTATCTGCC GGATACGATGCTGAGCGCCGACCATCGCAATCTGGCGGCGGCCGTGATTTTCATTCTCGCCGCGCTGACCGACTGGTTCG ACGGTTATCTCGCGCGGAAGTGGAACCAGACGTCGGCGTTCGGCGCGTTTCTCGACCCGGTCGCCGACAAGCTGATGGTG ACGGCCGCGCTGCTGATGCTCGTGCAGCTCGCGCGCATCGACGCGGCGATCGCGCTCGTGATCGTCGGCCGCGAAATCGC GATCTCGGCGCTGCGCGAATGGATGGCGCAGATCGGCGCATCGAAGAGCGTCGCGGTGAATTCGCTGGGCAAGTTCAAGA CCGCGTGCCAGATGGTCGCGATTCCGATGCTGCTCTTCTACGGCCGGCTGCCGTTCGGCGGCGGCGTCGCGATCGACACG CGCGGATGGGGCGAATGGCTGATCTATCTCGCGGCCGTGTTGACCATCTGGTCGATGCTTTACTACATGAAGCTCGCGTG GCCGCAGATTCGCGAGCGCGGCGGCGCGGCCTGA
Upstream 100 bases:
>100_bases CGCGGCTCGCGCCGGGCGGCGCGGCCCGTGCCGGGCGCCTTGCTTGTGGCGGCGCGGGCGACGCGGCACAATGGCAAATC CTTCAACCGTGTCGCGTGCC
Downstream 100 bases:
>100_bases GCGCGCCGCGGACCCGCACGGCGAGGCACGGGGCGAACACACGCTGAACTGCAGGCCGGATGGCGCGTCGGCAAGGGCAT CGAGGTCGTCGAAGAAAAAG
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARKWNQTSAFGAFLDPVADKLMV TAALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRLPFGGGVAIDT RGWGEWLIYLAAVLTIWSMLYYMKLAWPQIRERGGAA
Sequences:
>Translated_197_residues MPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARKWNQTSAFGAFLDPVADKLMV TAALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRLPFGGGVAIDT RGWGEWLIYLAAVLTIWSMLYYMKLAWPQIRERGGAA >Mature_196_residues PFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARKWNQTSAFGAFLDPVADKLMVT AALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMVAIPMLLFYGRLPFGGGVAIDTR GWGEWLIYLAAVLTIWSMLYYMKLAWPQIRERGGAA
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=189, Percent_Identity=48.1481481481481, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21786; Mature: 21655
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARK CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH WNQTSAFGAFLDPVADKLMVTAALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKSVAVNSLGKFKTACQMVAIPMLLFYGRLPFGGGVAIDTRGWGEWLIYLAAVLTIWSML CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH YYMKLAWPQIRERGGAA HHHHHHHHHHHHCCCCC >Mature Secondary Structure PFNFPIFLTWVRIVLIPLVVGVFYLPDTMLSADHRNLAAAVIFILAALTDWFDGYLARK CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH WNQTSAFGAFLDPVADKLMVTAALLMLVQLARIDAAIALVIVGREIAISALREWMAQIGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKSVAVNSLGKFKTACQMVAIPMLLFYGRLPFGGGVAIDTRGWGEWLIYLAAVLTIWSML CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH YYMKLAWPQIRERGGAA HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]