| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yhhW [C]
Identifier: 126452077
GI number: 126452077
Start: 2778866
End: 2779732
Strand: Reverse
Name: yhhW [C]
Synonym: BURPS1106A_2821
Alternate gene names: 126452077
Gene position: 2779732-2778866 (Counterclockwise)
Preceding gene: 126453875
Following gene: 126453657
Centisome position: 69.69
GC content: 68.86
Gene sequence:
>867_bases ATGAAGCAAATCGTCGGCGTGTACAGCGCGCCTCGTTCGCATTGGGTCGGCGACGGTTTTCCGGTGCGCTCGCTGTTCAG CTACGACAGCCATGGCACGCATCTGAGCCCGTTCCTGCTGCTCGATTACGCGGGCCCCGCGCGCTTCGAGCCGACCGCGC GGCGTCGCGGCGTCGGCCGGCATCCGCACCGTGGTTTCGAGACGGTGACGATCGTCTATCAGGGCGAGGTCGATCATCGC GACTCGACGGGCGCGGGCGGCCATATCGGCCCGGGCGACGTTCAATGGATGACGGCCGCGGGCGGCATCCTGCACGAGGA GTTTCATTCGGCGCGGTTCGCGCGCGACGGCGGCACGCTCGAGATGGTGCAGCTCTGGGTGAATCTGCCGGCGAAGGACA AGATGTCCGAGCCCGGTTACCAGACGTTGTTGAGCGAGCGCATTCCGTCGATCGAGCTGCCCGACGGCGCGGGCCGCGTG CGGGTGATCGCGGGCGAGTTCGAGGGCCGTCGCGGGCCGGCGCGCACGCATACGCCGCTCGACGTGTGGGACGTGCGCGT CGCGCAGGGCGGCCGCGTGCGGCTGCGCGCCGACGCGGGCCGCACGCTCGCGCTCGTCGTGCTGCGCGGCACGGTGCTCG TGAACGGCGAGGAAGTGGTGCGCGAAGCGCAGTTCGTGCAGTTCGCGCGAGACGGCAGCGACGTCGACATCGAGGCGAAC AACGATGCGACGCTGCTGTGGCTGAGCGGCGAGCCGATCGACGAGCCGATCGCGGGCTACGGCCCGTTCGTGATGAACAG CGACGAGGAAATCCGTCAGGCGATCGACGATTTCAACGGCGGCCGTTTCGGCACGATGAGCGCTTGA
Upstream 100 bases:
>100_bases TGAGTGTGATTTTCGCGGTCTACTGAATCCATCGTTCCGATTATATCTTCTATCCATCGATCGAAGCGTTCGCTTCGGCC ATCAATGCAAGGAGAGGAAC
Downstream 100 bases:
>100_bases CGAACGCCCCGCGACGAGCGGGGCGTTTCGCGCATTCGCGTGCCGCTCGTGCTCGGCGTCGCGCGCGAACGCGCAGGCGA GCGTTCGGCGCGGCCTCGCG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKQIVGVYSAPRSHWVGDGFPVRSLFSYDSHGTHLSPFLLLDYAGPARFEPTARRRGVGRHPHRGFETVTIVYQGEVDHR DSTGAGGHIGPGDVQWMTAAGGILHEEFHSARFARDGGTLEMVQLWVNLPAKDKMSEPGYQTLLSERIPSIELPDGAGRV RVIAGEFEGRRGPARTHTPLDVWDVRVAQGGRVRLRADAGRTLALVVLRGTVLVNGEEVVREAQFVQFARDGSDVDIEAN NDATLLWLSGEPIDEPIAGYGPFVMNSDEEIRQAIDDFNGGRFGTMSA
Sequences:
>Translated_288_residues MKQIVGVYSAPRSHWVGDGFPVRSLFSYDSHGTHLSPFLLLDYAGPARFEPTARRRGVGRHPHRGFETVTIVYQGEVDHR DSTGAGGHIGPGDVQWMTAAGGILHEEFHSARFARDGGTLEMVQLWVNLPAKDKMSEPGYQTLLSERIPSIELPDGAGRV RVIAGEFEGRRGPARTHTPLDVWDVRVAQGGRVRLRADAGRTLALVVLRGTVLVNGEEVVREAQFVQFARDGSDVDIEAN NDATLLWLSGEPIDEPIAGYGPFVMNSDEEIRQAIDDFNGGRFGTMSA >Mature_288_residues MKQIVGVYSAPRSHWVGDGFPVRSLFSYDSHGTHLSPFLLLDYAGPARFEPTARRRGVGRHPHRGFETVTIVYQGEVDHR DSTGAGGHIGPGDVQWMTAAGGILHEEFHSARFARDGGTLEMVQLWVNLPAKDKMSEPGYQTLLSERIPSIELPDGAGRV RVIAGEFEGRRGPARTHTPLDVWDVRVAQGGRVRLRADAGRTLALVVLRGTVLVNGEEVVREAQFVQFARDGSDVDIEAN NDATLLWLSGEPIDEPIAGYGPFVMNSDEEIRQAIDDFNGGRFGTMSA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=259, Percent_Identity=37.4517374517375, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI4505823, Length=259, Percent_Identity=37.4517374517375, Blast_Score=142, Evalue=5e-34, Organism=Escherichia coli, GI1789847, Length=198, Percent_Identity=24.2424242424242, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31542; Mature: 31542
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIVGVYSAPRSHWVGDGFPVRSLFSYDSHGTHLSPFLLLDYAGPARFEPTARRRGVGR CCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCC HPHRGFETVTIVYQGEVDHRDSTGAGGHIGPGDVQWMTAAGGILHEEFHSARFARDGGTL CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC EMVQLWVNLPAKDKMSEPGYQTLLSERIPSIELPDGAGRVRVIAGEFEGRRGPARTHTPL EEEHEECCCCCHHCCCCCHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCC DVWDVRVAQGGRVRLRADAGRTLALVVLRGTVLVNGEEVVREAQFVQFARDGSDVDIEAN CEEEEEECCCCEEEEEECCCCEEEEEEEECEEEECHHHHHHHHHHHHHHCCCCCEEEEEC NDATLLWLSGEPIDEPIAGYGPFVMNSDEEIRQAIDDFNGGRFGTMSA CCEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure MKQIVGVYSAPRSHWVGDGFPVRSLFSYDSHGTHLSPFLLLDYAGPARFEPTARRRGVGR CCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCC HPHRGFETVTIVYQGEVDHRDSTGAGGHIGPGDVQWMTAAGGILHEEFHSARFARDGGTL CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC EMVQLWVNLPAKDKMSEPGYQTLLSERIPSIELPDGAGRVRVIAGEFEGRRGPARTHTPL EEEHEECCCCCHHCCCCCHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCC DVWDVRVAQGGRVRLRADAGRTLALVVLRGTVLVNGEEVVREAQFVQFARDGSDVDIEAN CEEEEEECCCCEEEEEECCCCEEEEEEEECEEEECHHHHHHHHHHHHHHCCCCCEEEEEC NDATLLWLSGEPIDEPIAGYGPFVMNSDEEIRQAIDDFNGGRFGTMSA CCEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]