| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453850
Identifier: 126453850
GI number: 126453850
Start: 1069313
End: 1070638
Strand: Reverse
Name: 126453850
Synonym: BURPS1106A_1088
Alternate gene names: NA
Gene position: 1070638-1069313 (Counterclockwise)
Preceding gene: 126453231
Following gene: 126452887
Centisome position: 26.84
GC content: 69.76
Gene sequence:
>1326_bases TTGGGCGAGTGCGATACGGGTCTTCATCACGGGATCAGCGCGGCCTCCTCGGGCCACGGCGCGAACGGCTTTGGCAAACG CACGGGCGGCGCGGCAGCGCGCGCAGCCGGCCGTGCAGACGGGTACGAACGAAACGGATTCGAATCGTTGAAACACGAAC GTCGCGATTATCGCATGGGCATCCTCACGTCTGTCCTCGACGCAAGCGCCGCCGAGTGGGACGCGCTCGTCGCGCGCGCG CCGCGCCCGACGCCCTTCCTGAAGCATGCGTTCCTGAGCGCGCTGCACCGCGCCGGCTGCGCGACCGACGGCACCGGCTG GACGCCGCGCTTCGTCACGCTCGCGGACAGTGCGACGGACGCGCTCGTCGCGGCCGCGCCCGTCTATGCGAAGCGCCATT CGTATGGCGAATACGTGTTCGACTGGGCGTGGGCGGACGCGTACCAGCGCAACGGGCTGCCGTACTACCCGAAGCTGCTG TGCGCGGTGCCGTTCACGCCCGTGCAGGGCAGCCGGCTCCTCGCCGTCGACGACGACGCGCGCCGCCGGCTCGCCGCGAC GCTCGTCGCGCTCGCCGAGCAGAGCGACGTGTCGTCGCTGCACGTGCTGTTTCCGACGGGCGACGAGGCGCGCGCGCTCG CCGACATGGGGATGATGCTGCGCGAGGGCGTGCAATTCCACTGGCTGAACGACGGCTACCGCGACTTCGACGCGTTCCTC GGCACGCTCGAGCAGAAGAAGCGCAAGAACATCCGCGCGGAGCGCCGCAAGGTCGCGGACGCGGGCGTCACGCTGCGCCG CGTGCGCGGCGAGGACGCGACCGACGCCGATTGGCGCTTCTTCGCGCGCTGCTACCGGCAGACGTACCGCGAGCACTTCT CGAGCCCGTATCTGAATCTCGAATTCTTCCGCGAGATCGGCGCGACGATGCCGGAGAACCTGCTGCTCGTGATCGCCGAG CGCGACGGGCGGCCGATCGCGAGCGCGCTCGCCGTCTACCAGCGCGGCGAGGCGGGCGGCGGCACGCTGTACGGCCGCTA CTGGGGCGCGCTCGAACACGTGCCGTGCCTGCACTTCGAGACCGCGTACTACCAGTTGCTCGAATTCTGCATCGAAGAGC GGCTCGACACGTTCGAAGGCGGCGCGCAGGGCGAGCACAAGCTCGCACGCGGCTTCATGCCGACCGTCACGCATTCGGCG CACTGGCTCGCGCATCCGGCGTTCGCCGACGCGGTCGGGCACTTCCTCGCGCAGGAGACGAACCAGATTCACGCGTACGT CGACGAGCTGCGCGAGCACAATCCGTTCAGGGCCGGCGAGCGCTGA
Upstream 100 bases:
>100_bases CGGGCGCGATCAGCAGGTGCGCGCCGGCATCGTGCGCGGCCTGCGCGGCGGCGACGATCTTGGCGACGTTGCCGGCGAAA TCGCCGACGGTGACGTTGAG
Downstream 100 bases:
>100_bases GCCGGCCTTCGCGCCCGAGCGTGGAACCGGCGGACCGGGCGCGAACTGAACGCCCCACTCGCGTTCGGCTCGCGCCCGCG CTTGTGCCCGCGCTTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MGECDTGLHHGISAASSGHGANGFGKRTGGAAARAAGRADGYERNGFESLKHERRDYRMGILTSVLDASAAEWDALVARA PRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATDALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLL CAVPFTPVQGSRLLAVDDDARRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWLNDGYRDFDAFL GTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTYREHFSSPYLNLEFFREIGATMPENLLLVIAE RDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFETAYYQLLEFCIEERLDTFEGGAQGEHKLARGFMPTVTHSA HWLAHPAFADAVGHFLAQETNQIHAYVDELREHNPFRAGER
Sequences:
>Translated_441_residues MGECDTGLHHGISAASSGHGANGFGKRTGGAAARAAGRADGYERNGFESLKHERRDYRMGILTSVLDASAAEWDALVARA PRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATDALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLL CAVPFTPVQGSRLLAVDDDARRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWLNDGYRDFDAFL GTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTYREHFSSPYLNLEFFREIGATMPENLLLVIAE RDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFETAYYQLLEFCIEERLDTFEGGAQGEHKLARGFMPTVTHSA HWLAHPAFADAVGHFLAQETNQIHAYVDELREHNPFRAGER >Mature_440_residues GECDTGLHHGISAASSGHGANGFGKRTGGAAARAAGRADGYERNGFESLKHERRDYRMGILTSVLDASAAEWDALVARAP RPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATDALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLLC AVPFTPVQGSRLLAVDDDARRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWLNDGYRDFDAFLG TLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTYREHFSSPYLNLEFFREIGATMPENLLLVIAER DGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFETAYYQLLEFCIEERLDTFEGGAQGEHKLARGFMPTVTHSAH WLAHPAFADAVGHFLAQETNQIHAYVDELREHNPFRAGER
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49074; Mature: 48942
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGECDTGLHHGISAASSGHGANGFGKRTGGAAARAAGRADGYERNGFESLKHERRDYRMG CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATD HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHH ALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGSRLLAVDDDA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEECCHH RRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWLNDGYRDFDAFL HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH GTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTYREHFSSPYLNL HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFE HHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCHHHH TAYYQLLEFCIEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFADAVGHFLAQET HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHCCCCHHHCCHHHHHHHHHHHHHHH NQIHAYVDELREHNPFRAGER HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GECDTGLHHGISAASSGHGANGFGKRTGGAAARAAGRADGYERNGFESLKHERRDYRMG CCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATD HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHH ALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGSRLLAVDDDA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEECCHH RRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWLNDGYRDFDAFL HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH GTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTYREHFSSPYLNL HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFE HHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCHHHH TAYYQLLEFCIEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFADAVGHFLAQET HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHCCCCHHHCCHHHHHHHHHHHHHHH NQIHAYVDELREHNPFRAGER HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA