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The map label for this gene is omp32 [H]

Identifier: 126453231

GI number: 126453231

Start: 1073180

End: 1074271

Strand: Reverse

Name: omp32 [H]

Synonym: BURPS1106A_1091

Alternate gene names: 126453231

Gene position: 1074271-1073180 (Counterclockwise)

Preceding gene: 126454351

Following gene: 126453850

Centisome position: 26.93

GC content: 65.2

Gene sequence:

>1092_bases
ATGATGAAGAAAGTTATGCTCGCGGCGGTACTGGCGACTGCCGGAGTGGCGGCTCACGCTCAAAGCAGCGTGACGCTGTA
CGGCCGTCTGGACGCCGGCATCGAATACATGAACGGCCTGCCGAGCGCGAACGGCGGCAGCACGAGCCGCTGGCGCGCGG
AAAGCGGCAACTGGGGCACGAGCCTCTGGGGCTTGAAGGGCTCCGAGGACATCGGCGGCGGCAACAAGATCGTGTTCCAG
TTGGAAGGCAGCTTCGACACGATGAACGGCAACGGCCCGGGCGCCGGCAGCATCTGGAACCGCTGGGCAACGATCGGCAT
CTCCAACGACACGTACGGTACCCTGCTGCTCGGCCGCGAGCTCGCGATCGCGAACGGCGTGTGGGACTTCGATCCGTTCG
GCCAGTCGTCGTGGTCGACGGCTTCGCTCGTGCGCGGGCGCAACTGGAACAAGACCAGCAACAACATTTCGTATCAATCG
CCGAAGTTCTACGGCTTCGACGTCTACGGCCAATACGCGCTGTCGAACGCGACGAACTGGAACGGCAACGGCTCGACGAG
CCAGGGCCGCAGCGCGGGCCTGCAGCTCACCTACACGACCTCGCTGTTCCAGATCCGCGGCCTCTATGACGAAGCGCGCG
ATCCGGCGAACGGCAAGCTCGACGACGTGTTCAACTACTCGCGCGAATATTTCGCTGGCGTGAACGTGTTCCTCGGCCAG
TTCAAGCTGCAGGCGGCATACCAGGCGTCGCACGCGGACGGCGGCCCGGTCGTGAACAACGGCATCACGACGACCCAGCA
GGTCTGGGGCGGCGTGACGTGGCAGGCAACGCCCGCCGCCGCGCTGATCGCGGCCGTCTATCACGTGAACGCGAATCACG
GCGGCGGCAACGCGAACATCTTCACGGTCGGCGGCTCGTACAACCTGTCGAAGCGCACGCTGCTCGACGTGCAGGTCGCG
ACGGTGCGCAACAGCAAGACCGCGAACTTTGGCCTGAACGCGAACCCGGCCGGCACCGACATCTCGACCGGCAATCCGAA
GTTCGGCGGCAGCCAGACGGGCGTGTACGCCGGCATCCAGCACCTGTTCTGA

Upstream 100 bases:

>100_bases
GGCTGCACGCGGTCTCTCTGGTTACCCCAATTTTGCCCGACGCATGCGGCCGGGCATCTTGCGCAGTTCTGGGTTGACTT
TTTGACAGGGTATGGAGGAG

Downstream 100 bases:

>100_bases
TCACGCAAGCCGGATCGTTTGAACCGATAGTCTTTTCACGCTGCTGCGAGAGGCGCGTACCGGTGCGATACCTCACGGTA
TCGCACCGTTTTTTTATTCC

Product: putative outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGTSLWGLKGSEDIGGGNKIVFQ
LEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQS
PKFYGFDVYGQYALSNATNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVFLGQ
FKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIFTVGGSYNLSKRTLLDVQVA
TVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQHLF

Sequences:

>Translated_363_residues
MMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGTSLWGLKGSEDIGGGNKIVFQ
LEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQS
PKFYGFDVYGQYALSNATNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVFLGQ
FKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIFTVGGSYNLSKRTLLDVQVA
TVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQHLF
>Mature_363_residues
MMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGTSLWGLKGSEDIGGGNKIVFQ
LEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRELAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQS
PKFYGFDVYGQYALSNATNWNGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVFLGQ
FKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIFTVGGSYNLSKRTLLDVQVA
TVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQHLF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38496; Mature: 38496

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGT
CCHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEECCCCCCCC
SLWGLKGSEDIGGGNKIVFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRE
EEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHCEEEEEECCCCCEEEEEECE
LAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQSPKFYGFDVYGQYALSNATNW
EEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCC
NGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVFLGQ
CCCCCCCCCCCCCEEEEEEEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEHH
FKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANI
EEEEEHHHCCCCCCCCEECCCCCCHHHHHCCCEECCCHHHHHEEHHEEEECCCCCCCEEE
FTVGGSYNLSKRTLLDVQVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQ
EEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
HLF
HCC
>Mature Secondary Structure
MMKKVMLAAVLATAGVAAHAQSSVTLYGRLDAGIEYMNGLPSANGGSTSRWRAESGNWGT
CCHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEECCCCCCCC
SLWGLKGSEDIGGGNKIVFQLEGSFDTMNGNGPGAGSIWNRWATIGISNDTYGTLLLGRE
EEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHCEEEEEECCCCCEEEEEECE
LAIANGVWDFDPFGQSSWSTASLVRGRNWNKTSNNISYQSPKFYGFDVYGQYALSNATNW
EEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCC
NGNGSTSQGRSAGLQLTYTTSLFQIRGLYDEARDPANGKLDDVFNYSREYFAGVNVFLGQ
CCCCCCCCCCCCCEEEEEEEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEHH
FKLQAAYQASHADGGPVVNNGITTTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANI
EEEEEHHHCCCCCCCCEECCCCCCHHHHHCCCEECCCHHHHHEEHHEEEECCCCCCCEEE
FTVGGSYNLSKRTLLDVQVATVRNSKTANFGLNANPAGTDISTGNPKFGGSQTGVYAGIQ
EEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
HLF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]