| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453814
Identifier: 126453814
GI number: 126453814
Start: 3609075
End: 3609731
Strand: Direct
Name: 126453814
Synonym: BURPS1106A_3693
Alternate gene names: NA
Gene position: 3609075-3609731 (Clockwise)
Preceding gene: 126455225
Following gene: 126453444
Centisome position: 90.49
GC content: 58.9
Gene sequence:
>657_bases ATGAAACAGTTCAGCCGATTTTCCGCGACTACCGTCGCGATCGTCACCGCCGCGGCGCTTTCAGCCTGCTCGAGCGGCCC TTCCGACAGCGACGCCAAGGCTGCCATCCAGGCGTCCCTGGGAGGCTGCCAATACCTTTCGATCGACCACTTCGAGAAAG TCAACGGTACGCCGCAGGGCGATGGTCACTATCTCATAGACGTGAAATACACGGTGTCGATGAAGCCAACGCCCGACATC AAGGCTTATGCCAGCGAGAAGTACGCAGAGGAGGTCGACAACCTGAAGAAGCAACTCGCACATGCGCATGATGTCGAGAA CGCCTGGAAAGCTGATCAACAGGCTTGGATGCAGGCGAACCCCGGGCAGGACGCCGCCGCGTATGAAGTCGCCCACCAGG ACGGCTGGGCCGACTATCAGAAGGTCATGCCGCTCCTTCTCGGGGGCGATCAGCTCGTGAATAACGCACCGCGAGCAGCC AAAGCGGCAATCGAGCGCGCCATGCGGCAAAGTTGCCCCAACGTCAACTCGTCGCTGCTCGACAACTTCTTCACCGGAAA CGAGCCGGTTGAGCAGTATGCGGAGGGAATTTCAGAAACTTTCAGCGGCAAAGTCGCCATGACAAAAACGGACAACGGTT GGCAAGCAGACCGCTGA
Upstream 100 bases:
>100_bases GCGAGCTTGGGCATCCAACAAAACCCATAAGGACCTGCGTCCTTCCTCTTTCGCTCCCGGCGGCCTTACCTCGGGAGCGA TCTCTTCCTTACAAGACATC
Downstream 100 bases:
>100_bases TTCGCGCCCCGTGAAGCCCATCGGGCACCCGCGTCGCCGGAAGATGCCAACATGCTGAGGCGCGCCCTATGGTGCGCCTC TACCGCGCCGCACTTCTTTT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQGDGHYLIDVKYTVSMKPTPDI KAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQANPGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAA KAAIERAMRQSCPNVNSSLLDNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR
Sequences:
>Translated_218_residues MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQGDGHYLIDVKYTVSMKPTPDI KAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQANPGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAA KAAIERAMRQSCPNVNSSLLDNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR >Mature_218_residues MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQGDGHYLIDVKYTVSMKPTPDI KAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQANPGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAA KAAIERAMRQSCPNVNSSLLDNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23609; Mature: 23609
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECHHHHHHCCCCCCC DGHYLIDVKYTVSMKPTPDIKAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQAN CCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAAKAAIERAMRQSCPNVNSSLL CCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH DNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR HHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC >Mature Secondary Structure MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECHHHHHHCCCCCCC DGHYLIDVKYTVSMKPTPDIKAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQAN CCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAAKAAIERAMRQSCPNVNSSLL CCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH DNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR HHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA