| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is plcN
Identifier: 126453784
GI number: 126453784
Start: 2762626
End: 2764728
Strand: Direct
Name: plcN
Synonym: BURPS1106A_2804
Alternate gene names: 126453784
Gene position: 2762626-2764728 (Clockwise)
Preceding gene: 126452669
Following gene: 126453043
Centisome position: 69.27
GC content: 68.38
Gene sequence:
>2103_bases ATGACGAATCAGAATCGCCGGGACTTTCTGCGCCTCGCCGCCGGCACGGCGGGCGCGGCCGCGCTGCAGCTCTTTCCGCC CGTGATCCGCGAAGCGCTCGCGATTCCCGCGAACCGCCGCACCGGCACGATCCGCGACGTCGAGCACATCGTGATCCTGA TGCAGGAAAACCGCTCGTTCGATCATTACTTCGGCAAGCTGCGCGGCGTGCGCGGCTTCGGCGATCCGCGCCCGCTCGCG CTGCAGAACGGCAAGTCGGTGTTCCATCAGCCGGTGCTCCTCGGCCCGGCCGAGCTGCTGCCGTTCCATCCGGACGCGTC GAATCTCGGCATGCAGTTCCTGCAGGATCTGCCGCACGGCTGGCAGGACATGCACGGCGCATGGAACAAGGGGCGCTACG ACCGCTGGATCGCGAACAAGGGCACGACGACGATGGCCTACCTCGAGCGCGACGACATCCCGTTCCACTACCAGCTCGCC GACGCGTTCACGATCTGCGACGCGTACCACTGCTCGATCCCGAGCTCGACCGACCCGAACCGCTACTACATGTGGACGGG CTACGTCGGCAACGACGGCGCGGGCGGCGGCCCGGTGCTCGGCAACGAGGAGGCCGGCTACGGCTGGAGCACGTATCCGG AGACGCTCGAGCAGGCGGGCGTGTCGTGGAAGATCTATCAGGACATCGGCACGGGCCTCGACGCGGCGGGCTCGTGGGGC TGGACGCAGAACCCGTACATCGGCAACTACGGCGACAATTCGCTCCTCTATTTCAACCAGTACCGCAACGCGCAGCCGGG CAGCCCGCTGTACGACAAGGCGCGCACGGGCACGAACGTGAGCGCGGGCGGCACGCTGTTCGACGTGTTGCAGCAGGACG TGAAGAACGGCACGCTGCCGCAGGTGTCGTGGATCTGCGCGCCGGAAGCGTATTCCGAGCACCCGAACTGGCCGGCGAAC TACGGCGCGTGGTACGTCGAGCAGGTGCTGAAGGCACTGACGTCGAACCCGGACGTCTGGAGCAAGACCGCACTCTTCAT CACGTACGACGAAAACGACGGCTTCTTCGATCACGTCGCGCCGCCGTTCGCGCCGCAATCGCGCGAGAACGGACTGTCGA CGGTGTCGACCGCGGGCGAGATCTTCGCGGGCGACGCCACGCACATGGCCGGGCCGTACGGGCTCGGACCGCGCGTGCCG ATGCTCGTCGTGTCGCCGTGGACGAAGGGCGGCTGGGTCTGCTCGCAGACGTTCGATCACACGTCGCTGCTGCAATTCAT CGAGGCGCGCTTCAACGATCGCTACTCGGTGCGCGCGCCGAACGTGACGCCGTGGCGCCGCGCGGTGTGCGGCGATCTCA CGTCCGCGTTCAACTTCTCGAGCCCGGACGGCAGCTGGCCGCAACTGCCCGACACGAGCGGCTACGCGCCGCCCGATCGC AACCGCCATCCGAGCTACGTGCCGGTGCCGCCCGCCGCGCAGTCGATGCCGAAACAGGAGGCCGGCCTGCGCGCCGCGCG CGCGCTGCCGTACGAGCTCTTCGTGCTCGGCCGCATCGATCAGTCGACCGGCAAGTTCAAGCTGACCTTCGCGAACACGG GCCGGGCGGGCGCGGCGTTCCAGGTGACGGCCGGCAACCGCCTCGACGGCCCGTGGGCGTATACGGTCGAAGCGCGCAAG CGGCTGTCCGACGAATGGAGCACGGCGCTCACGCTGAGCATCTACGATCTGACCGTCTACGGCCCGAACGGCTTCCTGTG CCAGTTCCGCGGCTCGACCGCGGCAGCGCTCGGCTTGAGCGCGAACCCGGAGGTGATCTACGGCTATGACGTCGCGAACG GCAACATCACGCTGCGCCTGTCGAACCGCGGCCGCGCGGCGGTGCGGCTCACGGTCACGAACGCGTACGGCAACGCAGCC CCGCGCGTCTACGAGCTGAAGCCCGGCCAGCGGATCAACGACTACTGGGATCTGCGCGACAGCCACAGCTGGTACGACCT GAGCGTCTCCGACGGCGCGCCGAACGGCTTCCTGCGCCGCTTCGCGGGACACGTCGAGACGGGCCGGCCGAGCACGAGCG ATCCGCTGATCGCGACGGCCTGA
Upstream 100 bases:
>100_bases GGCGCTGCCGCGCAAGACGGCAGCCCGCGTTGCGACCACCTTCCCCTCGGCCGCTGCCGCTCCGGCGGTCTCGCCCCACT CCAGACAAGGAAGCGACAAC
Downstream 100 bases:
>100_bases GCGGCGCATCGCGCGCTCGCGTGCGTCGCTTCGGCGGCGCACGCGGCTCACGCAATGGACATGATCGCCCCGCTGCACGC GGGCGATCGCCGGCCGCGGC
Product: non-hemolytic phospholipase C (precursor)
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MTNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGDPRPLA LQNGKSVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDMHGAWNKGRYDRWIANKGTTTMAYLERDDIPFHYQLA DAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDAAGSWG WTQNPYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPAN YGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRENGLSTVSTAGEIFAGDATHMAGPYGLGPRVP MLVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRYSVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGYAPPDR NRHPSYVPVPPAAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRLDGPWAYTVEARK RLSDEWSTALTLSIYDLTVYGPNGFLCQFRGSTAAALGLSANPEVIYGYDVANGNITLRLSNRGRAAVRLTVTNAYGNAA PRVYELKPGQRINDYWDLRDSHSWYDLSVSDGAPNGFLRRFAGHVETGRPSTSDPLIATA
Sequences:
>Translated_700_residues MTNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGDPRPLA LQNGKSVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDMHGAWNKGRYDRWIANKGTTTMAYLERDDIPFHYQLA DAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDAAGSWG WTQNPYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPAN YGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRENGLSTVSTAGEIFAGDATHMAGPYGLGPRVP MLVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRYSVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGYAPPDR NRHPSYVPVPPAAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRLDGPWAYTVEARK RLSDEWSTALTLSIYDLTVYGPNGFLCQFRGSTAAALGLSANPEVIYGYDVANGNITLRLSNRGRAAVRLTVTNAYGNAA PRVYELKPGQRINDYWDLRDSHSWYDLSVSDGAPNGFLRRFAGHVETGRPSTSDPLIATA >Mature_699_residues TNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGDPRPLAL QNGKSVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDMHGAWNKGRYDRWIANKGTTTMAYLERDDIPFHYQLAD AFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDAAGSWGW TQNPYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANY GAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRENGLSTVSTAGEIFAGDATHMAGPYGLGPRVPM LVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRYSVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGYAPPDRN RHPSYVPVPPAAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRLDGPWAYTVEARKR LSDEWSTALTLSIYDLTVYGPNGFLCQFRGSTAAALGLSANPEVIYGYDVANGNITLRLSNRGRAAVRLTVTNAYGNAAP RVYELKPGQRINDYWDLRDSHSWYDLSVSDGAPNGFLRRFAGHVETGRPSTSDPLIATA
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHLN_BURPS (Q9RGS8)
Other databases:
- EMBL: AF107252 - EMBL: BX571965 - RefSeq: YP_108995.1 - ProteinModelPortal: Q9RGS8 - GeneID: 3093316 - GenomeReviews: BX571965_GR - KEGG: bps:BPSL2403 - HOGENOM: HBG565180 - OMA: NYGAWYI - ProtClustDB: CLSK896532 - BioCyc: BPSE272560:BPSL2403-MONOMER - BRENDA: 3.1.4.3 - InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 - TIGRFAMs: TIGR03396 - TIGRFAMs: TIGR01409
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase
EC number: =3.1.4.3
Molecular weight: Translated: 77078; Mature: 76946
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS51318 TAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSF CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCH DHYFGKLRGVRGFGDPRPLALQNGKSVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHG HHHHHHHCCCCCCCCCCCEEECCCCHHHHCCEEECHHHHCCCCCCHHHHHHHHHHHCCCC WQDMHGAWNKGRYDRWIANKGTTTMAYLERDDIPFHYQLADAFTICDAYHCSIPSSTDPN HHHHCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHEECCCCCCCCCC RYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDAAGSWG EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEHHHHCCCCCCCCCCC WTQNPYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLP CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC QVSWICAPEAYSEHPNWPANYGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVA CEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHCC PPFAPQSRENGLSTVSTAGEIFAGDATHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDH CCCCCCCCCCCCCHHHCCCCEEECCCHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCH TSLLQFIEARFNDRYSVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGYAPPDR HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC NRHPSYVPVPPAAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAF CCCCCCCCCCCCHHHCCCHHHCCHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCCCCEE QVTAGNRLDGPWAYTVEARKRLSDEWSTALTLSIYDLTVYGPNGFLCQFRGSTAAALGLS EEECCCCCCCCEEEEHHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEECCCCEEEEECC ANPEVIYGYDVANGNITLRLSNRGRAAVRLTVTNAYGNAAPRVYELKPGQRINDYWDLRD CCCCEEEEEEEECCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCHHHCCCC SHSWYDLSVSDGAPNGFLRRFAGHVETGRPSTSDPLIATA CCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEECC >Mature Secondary Structure TNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSF CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCH DHYFGKLRGVRGFGDPRPLALQNGKSVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHG HHHHHHHCCCCCCCCCCCEEECCCCHHHHCCEEECHHHHCCCCCCHHHHHHHHHHHCCCC WQDMHGAWNKGRYDRWIANKGTTTMAYLERDDIPFHYQLADAFTICDAYHCSIPSSTDPN HHHHCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHEECCCCCCCCCC RYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDAAGSWG EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEHHHHCCCCCCCCCCC WTQNPYIGNYGDNSLLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLP CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC QVSWICAPEAYSEHPNWPANYGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVA CEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHCC PPFAPQSRENGLSTVSTAGEIFAGDATHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDH CCCCCCCCCCCCCHHHCCCCEEECCCHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCH TSLLQFIEARFNDRYSVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGYAPPDR HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC NRHPSYVPVPPAAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAF CCCCCCCCCCCCHHHCCCHHHCCHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCCCCEE QVTAGNRLDGPWAYTVEARKRLSDEWSTALTLSIYDLTVYGPNGFLCQFRGSTAAALGLS EEECCCCCCCCEEEEHHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEECCCCEEEEECC ANPEVIYGYDVANGNITLRLSNRGRAAVRLTVTNAYGNAAPRVYELKPGQRINDYWDLRD CCCCEEEEEEEECCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCHHHCCCC SHSWYDLSVSDGAPNGFLRRFAGHVETGRPSTSDPLIATA CCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590