Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126453753

Identifier: 126453753

GI number: 126453753

Start: 3308951

End: 3310432

Strand: Direct

Name: 126453753

Synonym: BURPS1106A_3391

Alternate gene names: NA

Gene position: 3308951-3310432 (Clockwise)

Preceding gene: 126453095

Following gene: 126451784

Centisome position: 82.96

GC content: 63.83

Gene sequence:

>1482_bases
TTGTTTTTTAATGGCGTGATGCTGAAGACGCCCATGCCCACGCAGCACGAACTCGAGATGGTGACGCTCGAGGAACTCGT
GCCGAAGGACCACCTGCTGCGCCAGATCGATGCGGCGGTGGATTTCGAGTTCATCCGCGCGAAGGTGGCGCATCTGTATT
GCGCGGACAACGGGCGGCCGGCGCTCGATCCCGTGGTGATGTTCAAGCTGTTGTTCATCGGCTACCTGTTCGGGGTGCGC
AGCGAGCGGCAACTGATGCGTGAGGTCCAGGTCAACGTCGCCTATCGCTGGTTCGCCCGGTTCCGGCTGACCGACAAGGT
GCCGGATGCGTCAACGTTCTCGCAGAATCGCCGCCGACGCTTCACGGACACGACGGTGTATCAGGAGATCTTCGACGAGA
TCGTGCGGCAGGCGATCAAGCGCGGGCTGGTCGACGGTCGGGTGCTGTACACGGACAGCACGCACCTGAAGGCGAACGCG
AACAAGGGCAAGTTCGATGTGGTGAAGCTGGAGCAGACGCCGGCGGCCTACACGGAGGCATTGAACGCGGCCGTGGATGC
GGACCGGGCCGCGCATGGCAGGAAGCCGCTGGATCGCGACGACGATGAGCCGCCGTCGAGCAAGGACACCAAGCTCAGCC
GGACCGATCCGGACAGCGGCTACATGGTGCGGGACGACAAGCCGAAGGGGTTCTTCTATCTGGACCACCGCACGGTGGAT
GCCAAGCACGCGATCATCACCGATACGCATGTGACGCCGGCCTCGGTGCATGACAGCCAGCCGTATCTGGATCGGCTGGA
TCGCCAGCGCGAGCGCTTTGAGTTCAAGGTCGAGGCGGTGGGGCTGGATGCGGGCTACTTCACGCCGGCGGTGTGCCAGG
GGCTGGAGGAGCGAGGGATTGCCGGGGTGATGGGCTATCGCACGCCGAACCACAAGCCGGGCATGTTCTACAAACGGCAG
TTCAAGTACGACGCGTATCGCAACGAATACGTGTGCCCGCAGGGGCAGGCCCTGCCGTACAGCACGACCAATCGGCTCGG
CTATCGGGAATACAAATCCAATGCGCAGATCTGCGGGCGCTGCCCGGTACGATCGCAGTGCACGAACAGTGCGATCGCGG
TGAAGGTGGTAACGCGCCACGTGTGGGAGCGCGCCAAGGAGCGGGTGGACGCGCGGCGCTTGACCGAATGGGGCCAACGC
ATTTACGCGCGGCGCAAGCAGACGGTGGAGCGCAGCTTCGCCGATGCTAAGCAGCTGCATGGGCACCGTTATGCCCGTAT
GCGTGGGCTACGCAAGGTGGCCGAGCAGTGCTTGCTGGCCGCGGCGGCACAGAACATCAAGAAGATTGCGATGCTGCTGG
CGCGGAAGCGGAAAAAGGGGCCAGCGGGTCCCGATTGGCGCTTCGTGCGCATGCTGCTGCGTCTGGTGAGCGGTTTGCGC
TGCAGCTTCGACTACCCGCTCGCGGCGAACCCGCAATCCTGA

Upstream 100 bases:

>100_bases
CCGGCCCGGCCGGCCGCGAGCGCGCAACGCGCCCAAACGAAAAACGCCCCGGCCGGGGCGTTTTCAGATTGCTGACAAAC
CCTCGCCAAGTGGGGGGTTT

Downstream 100 bases:

>100_bases
TCCCAGAAAGACAAAACCCCACGCTCACAAAAACGTGGGGTTCGTCAGCAGTCTGACGCCCCGGACGGGGCGTTTTCTTC
ACCGTCGCCGCGCGCGGCGG

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; Transposase Is4 Family Protein; Transposase IS4 Family; ISCps6 Transposase; ISPsy22 Transposase Truncated; ISPsy6 Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase And Inactivated Derivative; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase ; Transposase Fragment IS5 Family; IS4 Transposase; Transposase For IS; ISPpu20 Transposase; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVR
SERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANA
NKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD
AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQ
FKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQR
IYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLR
CSFDYPLAANPQS

Sequences:

>Translated_493_residues
MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVR
SERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANA
NKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD
AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQ
FKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQR
IYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLR
CSFDYPLAANPQS
>Mature_493_residues
MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVR
SERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANA
NKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD
AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQ
FKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQR
IYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLR
CSFDYPLAANPQS

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56739; Mature: 56739

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRP
CCCCCEEEECCCCCCHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
ALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH
FTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEA
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHH
LNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEEC
AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGI
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCC
AGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGR
EEEECCCCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECC
CPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLH
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCE
CSFDYPLAANPQS
ECCCCCCCCCCCC
>Mature Secondary Structure
MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRP
CCCCCEEEECCCCCCHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
ALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH
FTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEA
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHH
LNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEEC
AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGI
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCC
AGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGR
EEEECCCCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECC
CPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLH
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCE
CSFDYPLAANPQS
ECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA