| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453747
Identifier: 126453747
GI number: 126453747
Start: 3613308
End: 3614393
Strand: Reverse
Name: 126453747
Synonym: BURPS1106A_3695
Alternate gene names: NA
Gene position: 3614393-3613308 (Counterclockwise)
Preceding gene: 126453158
Following gene: 126454874
Centisome position: 90.62
GC content: 57.92
Gene sequence:
>1086_bases GTGGATCTCGACGAATCTCAGCAACTGATTCGCGAGATCGCCGAGGATTTCCGCGACGGAGCCGCGGATTACACCCCTTG GGTTATGTTGTCGCAACGAGTTATCGAGGCCGAGAATTTCGTTCGTGCAATTCTCGCATCCGAAGACACTGGTTTTGAGG ATAAGCGAGATGATCAGGGGCGCCTCACCGAGCTCGTGTGCTTGTCGTTGGGGCACTACTATTTCTCGACCTTGATGTCC GGAAAATTCCTGACGGACATCGATACGCTGGAGCCGTATCGGCTACGCCCGATGGCGCAGGTCTATTTCGACGTCCGGCA CGGCCCGCAGTTCGGCCACTGTGGCACGCAGTACTTCAAGGCCCAGCCGTGGTTTCGACTGAACGACGAGGAGCCGTTTC GCTTCGAGATGTTCAACGAGGTGGTGCATGCGGTCCGCGCTGAAGCCGAGGCCCGGAACCTTGATCGTCTCGACGAATGG AACGAATCGCAGGCGAAGCAGCGCTTCAAGGCGATGATGCGCCATGTGCACTGGTGCTTTCGGAAGCGTCGCCGGATCTT CGTGATCCGCATGGATCTGTACTATCGGTCCGAGTTCGCGGGCAATGTATCGATCGAGCAGGTGAAAGAGCACCACGCGC TCTTCGTCAATCGTCTGCGGGCGCTCAAGGATATCCGGGCCAATCTCGTGGGCGGTATCTGGAAGCTCGAGTGGACGCAA CGCAAAGGTCATCACTTGCACTGGGTGTTCATGTTCGACGGCTCGCTCGTTCAAGATGCGTGGAAGTGGTCGAAGCTGAT CGACGAGGAGTGGCGTAAGGCTGCGCCTCGCGATAGTGGCTATACCCATTGCGGTAACTATGACGAGCACCGTAAGGTCG GCGTGGGCATGATTCACATCGACAACGATCCTGAGAAATTCGAGGTTTTCCAGGAGAAGGTCATCGATTACCTCGCCAAA AAGGATCAGGCGCTGTGCTTGAAGATCACGGACGGTACGCGTGCCTGGGGACGGTTCACCCCCGGCGGCAAGCGTGTAAG CAACGCTGGCCGGCCGCCTAAGTCGGGAGGAGGTCAGACGGCGTAG
Upstream 100 bases:
>100_bases CACCCGCATTCTGCGACCTGGCGAATCGCCCTTCATCGCGCCTCGCGCGAGCTACGCTTGGTACGACCGCGACCACGTGC TCCGGAGCCATGTCTTGCAC
Downstream 100 bases:
>100_bases CTGCTGCGAGCAACAGCCGGGTCATTGTGTGCCGCGGGATGAGACTGAACCTCTTATCCCGTTTTTCATTCCAGAACCGT GAAGGTTTGCATTTTGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MDLDESQQLIREIAEDFRDGAADYTPWVMLSQRVIEAENFVRAILASEDTGFEDKRDDQGRLTELVCLSLGHYYFSTLMS GKFLTDIDTLEPYRLRPMAQVYFDVRHGPQFGHCGTQYFKAQPWFRLNDEEPFRFEMFNEVVHAVRAEAEARNLDRLDEW NESQAKQRFKAMMRHVHWCFRKRRRIFVIRMDLYYRSEFAGNVSIEQVKEHHALFVNRLRALKDIRANLVGGIWKLEWTQ RKGHHLHWVFMFDGSLVQDAWKWSKLIDEEWRKAAPRDSGYTHCGNYDEHRKVGVGMIHIDNDPEKFEVFQEKVIDYLAK KDQALCLKITDGTRAWGRFTPGGKRVSNAGRPPKSGGGQTA
Sequences:
>Translated_361_residues MDLDESQQLIREIAEDFRDGAADYTPWVMLSQRVIEAENFVRAILASEDTGFEDKRDDQGRLTELVCLSLGHYYFSTLMS GKFLTDIDTLEPYRLRPMAQVYFDVRHGPQFGHCGTQYFKAQPWFRLNDEEPFRFEMFNEVVHAVRAEAEARNLDRLDEW NESQAKQRFKAMMRHVHWCFRKRRRIFVIRMDLYYRSEFAGNVSIEQVKEHHALFVNRLRALKDIRANLVGGIWKLEWTQ RKGHHLHWVFMFDGSLVQDAWKWSKLIDEEWRKAAPRDSGYTHCGNYDEHRKVGVGMIHIDNDPEKFEVFQEKVIDYLAK KDQALCLKITDGTRAWGRFTPGGKRVSNAGRPPKSGGGQTA >Mature_361_residues MDLDESQQLIREIAEDFRDGAADYTPWVMLSQRVIEAENFVRAILASEDTGFEDKRDDQGRLTELVCLSLGHYYFSTLMS GKFLTDIDTLEPYRLRPMAQVYFDVRHGPQFGHCGTQYFKAQPWFRLNDEEPFRFEMFNEVVHAVRAEAEARNLDRLDEW NESQAKQRFKAMMRHVHWCFRKRRRIFVIRMDLYYRSEFAGNVSIEQVKEHHALFVNRLRALKDIRANLVGGIWKLEWTQ RKGHHLHWVFMFDGSLVQDAWKWSKLIDEEWRKAAPRDSGYTHCGNYDEHRKVGVGMIHIDNDPEKFEVFQEKVIDYLAK KDQALCLKITDGTRAWGRFTPGGKRVSNAGRPPKSGGGQTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42402; Mature: 42402
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLDESQQLIREIAEDFRDGAADYTPWVMLSQRVIEAENFVRAILASEDTGFEDKRDDQG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH RLTELVCLSLGHYYFSTLMSGKFLTDIDTLEPYRLRPMAQVYFDVRHGPQFGHCGTQYFK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCHHHHC AQPWFRLNDEEPFRFEMFNEVVHAVRAEAEARNLDRLDEWNESQAKQRFKAMMRHVHWCF CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH RKRRRIFVIRMDLYYRSEFAGNVSIEQVKEHHALFVNRLRALKDIRANLVGGIWKLEWTQ HCCCEEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC RKGHHLHWVFMFDGSLVQDAWKWSKLIDEEWRKAAPRDSGYTHCGNYDEHRKVGVGMIHI CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE DNDPEKFEVFQEKVIDYLAKKDQALCLKITDGTRAWGRFTPGGKRVSNAGRPPKSGGGQT CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC A C >Mature Secondary Structure MDLDESQQLIREIAEDFRDGAADYTPWVMLSQRVIEAENFVRAILASEDTGFEDKRDDQG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH RLTELVCLSLGHYYFSTLMSGKFLTDIDTLEPYRLRPMAQVYFDVRHGPQFGHCGTQYFK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCHHHHC AQPWFRLNDEEPFRFEMFNEVVHAVRAEAEARNLDRLDEWNESQAKQRFKAMMRHVHWCF CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH RKRRRIFVIRMDLYYRSEFAGNVSIEQVKEHHALFVNRLRALKDIRANLVGGIWKLEWTQ HCCCEEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC RKGHHLHWVFMFDGSLVQDAWKWSKLIDEEWRKAAPRDSGYTHCGNYDEHRKVGVGMIHI CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE DNDPEKFEVFQEKVIDYLAKKDQALCLKITDGTRAWGRFTPGGKRVSNAGRPPKSGGGQT CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA