| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453158
Identifier: 126453158
GI number: 126453158
Start: 3614512
End: 3615657
Strand: Reverse
Name: 126453158
Synonym: BURPS1106A_3696
Alternate gene names: NA
Gene position: 3615657-3614512 (Counterclockwise)
Preceding gene: 126452029
Following gene: 126453747
Centisome position: 90.65
GC content: 63.44
Gene sequence:
>1146_bases TTGGCGTGCGCGTGGCTCGGTGCGCCCTGGCTCGTCAGTTTCCACGTCAAACGACGCGAAAAGGAAAAAATGAACGCTTT CAACATACCGGGCGATAGCCCGGTCATCAACGTGTCCACCGATGAGATTTTCGGCTTCCGATTGCCCGCCCTTTGGGCGA TCCTGGCCATCACGATCGCGTTGCTGGCGACCGCCGTGTCGCTCGGCATCGCCGCTTACGCTGGTGGGCTGCGCGGCGGT ACGGCCGTGCAGCGGACAATGATCGTGGCATTGGCCTGCGTGGCCGTGCTCTATGTGCACCTGATCCCGATGTGTTGGTG CGCCTTCTCCGTATCGGCGCGCGTCGCTGGTGGCGTGCTGTGGATCGTCGGCATTGTAGTCGTCATGGTCGGTCAGGTAA CTTTCTTCGTCGAATCGCAACGGGACGCAGGCAATCAACGCGCGGCGTCGGTGCCGGTTGTCGAAGCTCCGAATTCTGTC GACGTGCCCCAACACCGCGGTCTCGCGGAAATCGCCGGAGACCGTGTTCAGGTGGTCGCTGATCTGGCGCGTATCGAGGC GCGTCGGTGCATGGGGCTTTGCCTGAGTGTCGCCGTCAGCAAAGCCAAGCTGAATGCGCAGCTCGCCGCACTCGATGCCG AGACGGCCGAGGCAAAACGGCGCGAAGCCGAAGAAGACCGTGCGGTCGCACAAGTCGAGCGTGACGACGCGCTACGCGCG AGTCTGCGGGCCGACTTGGTCGCTTCGCAGATCGCATCGTTAACCGGTACGACCGAATCGCAACTGGAACTGATGCAGGA CGTTGCATTCGCGGTCGTGCTCGAAGGCGCTGCCGTCATGGGCTGGCTGCTGGTCGCTCGTGTTTGGCCGCGCGTGCGGG TCGCGCCGGAGGTTGCTACGGGTCTTGCGATGGTGTCCGACGACCCGGCGAGTCTGAAGACCGCATCGGCCGTTGTCGTG GGCGGTATAAGCCTTTCGACCAGGTCGGAGGACGATCGCGTGTTGGACCAAATCCACGCGGAAGTTGTCGCAGGCCGGTT GAGGCCGACGCAGGCTGCGATTCGCGAATTCTTGGGGCGGGGACAGGCGACGGCGGGACGTTTCGCGCGGCTCTATCGTT CCCGTTTCAACAACGGGAGCGAGTGA
Upstream 100 bases:
>100_bases CACCGCCGATTTCTGGTTCGCTTGATCCCTTGGCCCGCTTGCTGCGCCTGCGGGCCGATGCCCTCATTGCCCGCATTCGC GCCGACCGCGCAGCCGAACT
Downstream 100 bases:
>100_bases AGGGCATATGGATAAGAGCACCCGCATTCTGCGACCTGGCGAATCGCCCTTCATCGCGCCTCGCGCGAGCTACGCTTGGT ACGACCGCGACCACGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MACAWLGAPWLVSFHVKRREKEKMNAFNIPGDSPVINVSTDEIFGFRLPALWAILAITIALLATAVSLGIAAYAGGLRGG TAVQRTMIVALACVAVLYVHLIPMCWCAFSVSARVAGGVLWIVGIVVVMVGQVTFFVESQRDAGNQRAASVPVVEAPNSV DVPQHRGLAEIAGDRVQVVADLARIEARRCMGLCLSVAVSKAKLNAQLAALDAETAEAKRREAEEDRAVAQVERDDALRA SLRADLVASQIASLTGTTESQLELMQDVAFAVVLEGAAVMGWLLVARVWPRVRVAPEVATGLAMVSDDPASLKTASAVVV GGISLSTRSEDDRVLDQIHAEVVAGRLRPTQAAIREFLGRGQATAGRFARLYRSRFNNGSE
Sequences:
>Translated_381_residues MACAWLGAPWLVSFHVKRREKEKMNAFNIPGDSPVINVSTDEIFGFRLPALWAILAITIALLATAVSLGIAAYAGGLRGG TAVQRTMIVALACVAVLYVHLIPMCWCAFSVSARVAGGVLWIVGIVVVMVGQVTFFVESQRDAGNQRAASVPVVEAPNSV DVPQHRGLAEIAGDRVQVVADLARIEARRCMGLCLSVAVSKAKLNAQLAALDAETAEAKRREAEEDRAVAQVERDDALRA SLRADLVASQIASLTGTTESQLELMQDVAFAVVLEGAAVMGWLLVARVWPRVRVAPEVATGLAMVSDDPASLKTASAVVV GGISLSTRSEDDRVLDQIHAEVVAGRLRPTQAAIREFLGRGQATAGRFARLYRSRFNNGSE >Mature_380_residues ACAWLGAPWLVSFHVKRREKEKMNAFNIPGDSPVINVSTDEIFGFRLPALWAILAITIALLATAVSLGIAAYAGGLRGGT AVQRTMIVALACVAVLYVHLIPMCWCAFSVSARVAGGVLWIVGIVVVMVGQVTFFVESQRDAGNQRAASVPVVEAPNSVD VPQHRGLAEIAGDRVQVVADLARIEARRCMGLCLSVAVSKAKLNAQLAALDAETAEAKRREAEEDRAVAQVERDDALRAS LRADLVASQIASLTGTTESQLELMQDVAFAVVLEGAAVMGWLLVARVWPRVRVAPEVATGLAMVSDDPASLKTASAVVVG GISLSTRSEDDRVLDQIHAEVVAGRLRPTQAAIREFLGRGQATAGRFARLYRSRFNNGSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40606; Mature: 40475
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: PS00261 GLYCO_HORMONE_BETA_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAWLGAPWLVSFHVKRREKEKMNAFNIPGDSPVINVSTDEIFGFRLPALWAILAITIA CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH LLATAVSLGIAAYAGGLRGGTAVQRTMIVALACVAVLYVHLIPMCWCAFSVSARVAGGVL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WIVGIVVVMVGQVTFFVESQRDAGNQRAASVPVVEAPNSVDVPQHRGLAEIAGDRVQVVA HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHHHHH DLARIEARRCMGLCLSVAVSKAKLNAQLAALDAETAEAKRREAEEDRAVAQVERDDALRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRADLVASQIASLTGTTESQLELMQDVAFAVVLEGAAVMGWLLVARVWPRVRVAPEVAT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHH GLAMVSDDPASLKTASAVVVGGISLSTRSEDDRVLDQIHAEVVAGRLRPTQAAIREFLGR CHHEECCCCHHHHHHCCCEEECEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC GQATAGRFARLYRSRFNNGSE CCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ACAWLGAPWLVSFHVKRREKEKMNAFNIPGDSPVINVSTDEIFGFRLPALWAILAITIA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH LLATAVSLGIAAYAGGLRGGTAVQRTMIVALACVAVLYVHLIPMCWCAFSVSARVAGGVL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WIVGIVVVMVGQVTFFVESQRDAGNQRAASVPVVEAPNSVDVPQHRGLAEIAGDRVQVVA HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHHHHH DLARIEARRCMGLCLSVAVSKAKLNAQLAALDAETAEAKRREAEEDRAVAQVERDDALRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRADLVASQIASLTGTTESQLELMQDVAFAVVLEGAAVMGWLLVARVWPRVRVAPEVAT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHH GLAMVSDDPASLKTASAVVVGGISLSTRSEDDRVLDQIHAEVVAGRLRPTQAAIREFLGR CHHEECCCCHHHHHHCCCEEECEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC GQATAGRFARLYRSRFNNGSE CCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA