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The map label for this gene is ybeQ [H]

Identifier: 126453702

GI number: 126453702

Start: 163869

End: 164645

Strand: Direct

Name: ybeQ [H]

Synonym: BURPS1106A_0176

Alternate gene names: 126453702

Gene position: 163869-164645 (Clockwise)

Preceding gene: 126454865

Following gene: 126455226

Centisome position: 4.11

GC content: 74.13

Gene sequence:

>777_bases
ATGAGCGGGAAACGCCGCGGCGCGCCGCTCTCTACGCGCACGCCGCGTGTGCTGCGCGGCGCGGTAATCGGTTCGCTCGC
CGCGGCGGCGCTCGGTGCGGCGGCGGGCGGCGCGCTCGCGCAGGCGCCGGGCGCGCCGAGCCGGCCCGACCCGCAGCGCG
AGACCGAAGCGGCGGTGGCCGACTACAACGCGGGCAATCTGCGCGCGGCGCTCGTGCAGTTTCACGATGCGGCGGCGCGC
GGCAACCGTCTCGCCGCGTTCGATTACGCGATGATGCTGATCAACGGTGAGGGCGTGACGGCGAACGTGCCGGAAGGATT
GCGCTGGCTGCGGCGCGCGGCCGATGCGGGGATGACGCAGGCGCAGTACGTGTACGGCCGGATGCTCGACGACGGCGAAT
TCGTCGCGCGCGATCCGGCGGCCGCGCACGACTGGTTCCTGAAGGCCGCGCAGCAAGGGCACGTGCAGGCCGAGCTCGCG
CTCGCGAACCAGTTTCTCGACGGGCGCGGCACGCCGCGCGACAACCGGCAGGCGTTTGCCTGGTACAAGCGCGCGGCCGA
CGCGGGCGAGCCGGTTTCGCAATACGTGACCGCGTCGTTCTACGAGCGCGGCGGCGACGGCGTCGCGCGCAATCTCGACA
TCGCCCGCGCGTACTATGCGGCCGCCGCCGCGCAGGGCGACGACGCGGCGGCGCTCAAGTATCGCGAGCTCACGGCCGCG
CAGAAGGCGGGGCCGGGCGGCGCGTCGGCGCCGAAGGCGACCGGGCCGTCGTACTGA

Upstream 100 bases:

>100_bases
CGCGCCAGTCTCTCGAAGCCGGATTCCGCGTGGTCGCGTTGTCCGCGGACGTCGTGTGGCTGCTGCGCGCGACGCGACAG
GCGCTGCAGGAGGTGCGGGG

Downstream 100 bases:

>100_bases
CACGCGTACCGGCCGGCAGTCGGGCCGATCGGATGAATGCGTGGGTCGGGATCACGCGGGGGGAACCGAAGGCATGCCGG
ATCGGCCGAATTGGCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSGKRRGAPLSTRTPRVLRGAVIGSLAAAALGAAAGGALAQAPGAPSRPDPQRETEAAVADYNAGNLRAALVQFHDAAAR
GNRLAAFDYAMMLINGEGVTANVPEGLRWLRRAADAGMTQAQYVYGRMLDDGEFVARDPAAAHDWFLKAAQQGHVQAELA
LANQFLDGRGTPRDNRQAFAWYKRAADAGEPVSQYVTASFYERGGDGVARNLDIARAYYAAAAAQGDDAAALKYRELTAA
QKAGPGGASAPKATGPSY

Sequences:

>Translated_258_residues
MSGKRRGAPLSTRTPRVLRGAVIGSLAAAALGAAAGGALAQAPGAPSRPDPQRETEAAVADYNAGNLRAALVQFHDAAAR
GNRLAAFDYAMMLINGEGVTANVPEGLRWLRRAADAGMTQAQYVYGRMLDDGEFVARDPAAAHDWFLKAAQQGHVQAELA
LANQFLDGRGTPRDNRQAFAWYKRAADAGEPVSQYVTASFYERGGDGVARNLDIARAYYAAAAAQGDDAAALKYRELTAA
QKAGPGGASAPKATGPSY
>Mature_257_residues
SGKRRGAPLSTRTPRVLRGAVIGSLAAAALGAAAGGALAQAPGAPSRPDPQRETEAAVADYNAGNLRAALVQFHDAAARG
NRLAAFDYAMMLINGEGVTANVPEGLRWLRRAADAGMTQAQYVYGRMLDDGEFVARDPAAAHDWFLKAAQQGHVQAELAL
ANQFLDGRGTPRDNRQAFAWYKRAADAGEPVSQYVTASFYERGGDGVARNLDIARAYYAAAAAQGDDAAALKYRELTAAQ
KAGPGGASAPKATGPSY

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=177, Percent_Identity=30.5084745762712, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI87081769, Length=162, Percent_Identity=32.0987654320988, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 26965; Mature: 26834

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKRRGAPLSTRTPRVLRGAVIGSLAAAALGAAAGGALAQAPGAPSRPDPQRETEAAVA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH
DYNAGNLRAALVQFHDAAARGNRLAAFDYAMMLINGEGVTANVPEGLRWLRRAADAGMTQ
CCCCCHHHHHHHHHHHHHHCCCEEEHEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHH
AQYVYGRMLDDGEFVARDPAAAHDWFLKAAQQGHVQAELALANQFLDGRGTPRDNRQAFA
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
WYKRAADAGEPVSQYVTASFYERGGDGVARNLDIARAYYAAAAAQGDDAAALKYRELTAA
HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QKAGPGGASAPKATGPSY
HHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGKRRGAPLSTRTPRVLRGAVIGSLAAAALGAAAGGALAQAPGAPSRPDPQRETEAAVA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH
DYNAGNLRAALVQFHDAAARGNRLAAFDYAMMLINGEGVTANVPEGLRWLRRAADAGMTQ
CCCCCHHHHHHHHHHHHHHCCCEEEHEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHH
AQYVYGRMLDDGEFVARDPAAAHDWFLKAAQQGHVQAELALANQFLDGRGTPRDNRQAFA
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
WYKRAADAGEPVSQYVTASFYERGGDGVARNLDIARAYYAAAAAQGDDAAALKYRELTAA
HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QKAGPGGASAPKATGPSY
HHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]