Click here to switch to the map view.

The map label for this gene is 126453694

Identifier: 126453694

GI number: 126453694

Start: 1150100

End: 1150576

Strand: Direct

Name: 126453694

Synonym: BURPS1106A_1169

Alternate gene names: NA

Gene position: 1150100-1150576 (Clockwise)

Preceding gene: 126452801

Following gene: 126451669

Centisome position: 28.84

GC content: 68.13

Gene sequence:

>477_bases
ATGCTGCGCGGCTTTCCTCCCGTCGCGTCGCCCGGCACGCACACGCTGATTCTCGGCAGTTTTCCCGGCGAGGCGTCGCT
TGCGGCCGCGCAGTACTACGCGCATCCGCGCAATCAGTTCTGGCGGCTCTTGGGGGCCGTGCTCGGCGAGCCGCAGCTGC
ACGCGCTGCCGTACGACGCGCGGCTGGCGCGCGTGCTCGCGCACGGCTTCGGCATCTGGGACGTGCTCGCCGCATGCCAT
CGCGAGGGCAGCCTCGATGCGGCGATTCGTCATGCGCAGCCGAACGATTTCGCGTCGCTGCGCGAAGTCGCGCCGAAGCT
GACGAAGGTGTGCTTCAACGGCAAGACGGCGGGACGCTTCGAGCCGCCGATACGCGCGGCGGGGTTCGATACGCTCGTGC
TGCCGTCGTCGAGCCCGGCGAATGCGATGCTGTCGTTCGAGCAGAAGCTGGTTTTCTGGCAGCGTATCGTCGGTTGA

Upstream 100 bases:

>100_bases
GCGGCACGCCGCTGATGGTGACCGAATGCATGCTGCCCGCGCTGTGGCGGCATCTCGACGCACACGGCGAGCGCCGCGCG
CGCGGCCTCGAGCAGACGTG

Downstream 100 bases:

>100_bases
CGCATGCGTGCGCCGCGTGCGCGCGCCGCGTGCGCGGCGCGGTTCAGGCTCGGGCGTTTCCCGTTCGTTTTCGCGCCGGT
CCACGCGAATTCGCGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; Mug GT/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLRGFPPVASPGTHTLILGSFPGEASLAAAQYYAHPRNQFWRLLGAVLGEPQLHALPYDARLARVLAHGFGIWDVLAACH
REGSLDAAIRHAQPNDFASLREVAPKLTKVCFNGKTAGRFEPPIRAAGFDTLVLPSSSPANAMLSFEQKLVFWQRIVG

Sequences:

>Translated_158_residues
MLRGFPPVASPGTHTLILGSFPGEASLAAAQYYAHPRNQFWRLLGAVLGEPQLHALPYDARLARVLAHGFGIWDVLAACH
REGSLDAAIRHAQPNDFASLREVAPKLTKVCFNGKTAGRFEPPIRAAGFDTLVLPSSSPANAMLSFEQKLVFWQRIVG
>Mature_158_residues
MLRGFPPVASPGTHTLILGSFPGEASLAAAQYYAHPRNQFWRLLGAVLGEPQLHALPYDARLARVLAHGFGIWDVLAACH
REGSLDAAIRHAQPNDFASLREVAPKLTKVCFNGKTAGRFEPPIRAAGFDTLVLPSSSPANAMLSFEQKLVFWQRIVG

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17172; Mature: 17172

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGFPPVASPGTHTLILGSFPGEASLAAAQYYAHPRNQFWRLLGAVLGEPQLHALPYDA
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHH
RLARVLAHGFGIWDVLAACHREGSLDAAIRHAQPNDFASLREVAPKLTKVCFNGKTAGRF
HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
EPPIRAAGFDTLVLPSSSPANAMLSFEQKLVFWQRIVG
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRGFPPVASPGTHTLILGSFPGEASLAAAQYYAHPRNQFWRLLGAVLGEPQLHALPYDA
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHH
RLARVLAHGFGIWDVLAACHREGSLDAAIRHAQPNDFASLREVAPKLTKVCFNGKTAGRF
HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
EPPIRAAGFDTLVLPSSSPANAMLSFEQKLVFWQRIVG
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA