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The map label for this gene is ubiC [H]

Identifier: 126452801

GI number: 126452801

Start: 1149498

End: 1150100

Strand: Direct

Name: ubiC [H]

Synonym: BURPS1106A_1168

Alternate gene names: 126452801

Gene position: 1149498-1150100 (Clockwise)

Preceding gene: 126451945

Following gene: 126453694

Centisome position: 28.82

GC content: 75.79

Gene sequence:

>603_bases
ATGGCGCGGATGCGTTTCGACGCCGCCGATGCGCACTGGCGCGAGACGCCGCGCCCCGGCGCGTCGAGCGCGCAGAAGGA
CTGGCTCACGCGCGGCGGCTCGCTCACCGCGCACCTCGCGCGGCTCGGCCGCGTGACGGTGCGCGTGACGCGCGAGACGG
TCGCGGCGCCGTGGGCCGACGAGCATCGCGCGCTTTCCTGCGCGTCGCGCGCGCCGGTGTGGGTGCGCGAGGTCGTGCTC
GCGGTCGACGGCGCGCCGTTCGTCGCCGCGCACAGCATCGCGCCGCTCGCCGCGAGCAAGGGCGTGTGGCAGGCGATGCG
GCGGCTGCGCACGCGCCCGCTCGCCGAGCTGCTCTATAGCGATCCGGAAGTGACGCGCTCGGCGCTCGTGAGCCGGCGCG
TGCTCGCCGGGCATCCGTTGTTCTCGCTCGCATCGCTCGCGCTCGCGCGCGCGCATGCGACGGAGCACGCGTTCGCCGCA
CGCCGCTCGGTGTTCGAGCGGCGCGGCACGCCGCTGATGGTGACCGAATGCATGCTGCCCGCGCTGTGGCGGCATCTCGA
CGCACACGGCGAGCGCCGCGCGCGCGGCCTCGAGCAGACGTGA

Upstream 100 bases:

>100_bases
TGCTGTTCGATCAGGCGCTGCTCGCCGAAGGCGGCGCGCTCGAGGATCCGGCGAGCTTCGTGAAGCGGACCAACGCGCTG
CTGCTGTCGCGCGCGGCGTG

Downstream 100 bases:

>100_bases
TGCTGCGCGGCTTTCCTCCCGTCGCGTCGCCCGGCACGCACACGCTGATTCTCGGCAGTTTTCCCGGCGAGGCGTCGCTT
GCGGCCGCGCAGTACTACGC

Product: chorismate--pyruvate lyase

Products: NA

Alternate protein names: CL 2; CPL 2 [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MARMRFDAADAHWRETPRPGASSAQKDWLTRGGSLTAHLARLGRVTVRVTRETVAAPWADEHRALSCASRAPVWVREVVL
AVDGAPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYSDPEVTRSALVSRRVLAGHPLFSLASLALARAHATEHAFAA
RRSVFERRGTPLMVTECMLPALWRHLDAHGERRARGLEQT

Sequences:

>Translated_200_residues
MARMRFDAADAHWRETPRPGASSAQKDWLTRGGSLTAHLARLGRVTVRVTRETVAAPWADEHRALSCASRAPVWVREVVL
AVDGAPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYSDPEVTRSALVSRRVLAGHPLFSLASLALARAHATEHAFAA
RRSVFERRGTPLMVTECMLPALWRHLDAHGERRARGLEQT
>Mature_199_residues
ARMRFDAADAHWRETPRPGASSAQKDWLTRGGSLTAHLARLGRVTVRVTRETVAAPWADEHRALSCASRAPVWVREVVLA
VDGAPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYSDPEVTRSALVSRRVLAGHPLFSLASLALARAHATEHAFAAR
RSVFERRGTPLMVTECMLPALWRHLDAHGERRARGLEQT

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway [H]

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007440 [H]

Pfam domain/function: PF04345 Chor_lyase [H]

EC number: =4.1.3.40 [H]

Molecular weight: Translated: 22103; Mature: 21971

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMRFDAADAHWRETPRPGASSAQKDWLTRGGSLTAHLARLGRVTVRVTRETVAAPWAD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHCCCCC
EHRALSCASRAPVWVREVVLAVDGAPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYS
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DPEVTRSALVSRRVLAGHPLFSLASLALARAHATEHAFAARRSVFERRGTPLMVTECMLP
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALWRHLDAHGERRARGLEQT
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARMRFDAADAHWRETPRPGASSAQKDWLTRGGSLTAHLARLGRVTVRVTRETVAAPWAD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHCCCCC
EHRALSCASRAPVWVREVVLAVDGAPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYS
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DPEVTRSALVSRRVLAGHPLFSLASLALARAHATEHAFAARRSVFERRGTPLMVTECMLP
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALWRHLDAHGERRARGLEQT
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA